Sphingobium sp. YG1: YGS_C2P1479
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Entry
YGS_C2P1479 CDS
T05858
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K24073
RNA polymerase sigma factor CnrH
Organism
spyg
Sphingobium sp. YG1
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spyg03021
]
YGS_C2P1479
Transcription machinery [BR:
spyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
YGS_C2P1479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
PhyR_sigma-like
Sigma70_ECF
DUF134
HTH_23
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
BBD03465
UniProt:
A0A2Z6ANX1
LinkDB
All DBs
Position
2:complement(1834613..1835140)
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AA seq
175 aa
AA seq
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MATRALAGDQAAYGALMRRHRDAMFRLARGAIGDPDEALDITQESFVAAFAALARYDGSR
PFRIWIARITLNKCRDWGRRRAVRRFFAFANPIDDALDIADAGATPEEAARSAQEVARIN
AVIATLPANLKNVLLLRTIEQMSQAEAAQVLGITEKAVETRLYRARAKLAEILRD
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
ttggccactcgcgcgctggccggggatcaggccgcctatggggcgctgatgcggcggcat
cgcgacgccatgtttcggctggcgcgcggggccatcggcgatcctgacgaagcgctcgac
atcacgcaggaaagtttcgtcgccgccttcgccgcgctcgcccgctatgacggatcgcgc
ccgttccgcatctggatcgcgcgcatcaccctcaacaaatgccgcgactgggggcgtcgc
cgtgccgtccgtcgtttcttcgcctttgccaaccccatcgacgatgcgctcgacattgcg
gacgccggtgcgacaccggaggaagcggcgcgatccgcgcaggaggtcgcccgcatcaac
gctgtcatcgctacgctgccggccaatctgaagaatgtcctgctgctccgcacgatcgag
cagatgagccaggccgaagccgcgcaggtgctgggcattacagagaaggcggtcgaaacc
cgcctctaccgcgctcgcgcaaaactcgctgaaattttgagggattga
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