Sphingobium sp. YG1: YGS_C3P0084
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Entry
YGS_C3P0084 CDS
T05858
Name
(GenBank) hypothetical protein
KO
K18302
membrane fusion protein, multidrug efflux system
Organism
spyg
Sphingobium sp. YG1
Module
spyg_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spyg02000
]
YGS_C3P0084
01504 Antimicrobial resistance genes [BR:
spyg01504
]
YGS_C3P0084
Transporters [BR:
spyg02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
YGS_C3P0084
Antimicrobial resistance genes [BR:
spyg01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
YGS_C3P0084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
Biotin_lipoyl
SHOCT
Qn_am_d_aIII
CusB_dom_1
Motif
Other DBs
NCBI-ProteinID:
BBD03559
UniProt:
A0A2Z6APP1
LinkDB
All DBs
Position
pYGP1:complement(101416..102489)
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AA seq
357 aa
AA seq
DB search
MARFAHIVPIALLLLPACRDEPQVRDERRAVAVQRIRADAGIGTTYAGEIRSAFESQIGF
EVAGRIVERRVDLGSSVHAGQTLLRLDNSDYARALDSAAAQSGSARTAAAVQQADLARSR
ELLKQGFISPAEFDQQKAAAVQAQAQLRAAGAQSGTASAQLGRTVLTAPRAGVVTQIQGE
VGQVVGAGQAIVTLADPSRPEIAVALPEGSLDRIRSASRLSVSVWSSPGRRYAARLRSIS
GAADPATRTFAARLSVDAPAQALLMGETAELRVEGDAGDAAVRVPLTAVLQSNGRAQAWV
LDRRTMVVQPRAVQIGAAQGDMLTIRSGLKPGETIVTAGVHLLRAGEKVRIVQVPQS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcacgttttgcccatatcgtaccgatcgcgttgctgctgcttccggcctgtcgggat
gagccgcaggtcagggatgaacgacgcgccgtggccgtccagcgcattcgcgccgatgcc
ggcatcggcacaacctatgccggcgaaatccggtccgccttcgaaagccagatcggtttc
gaagtggcgggccggatcgtcgagcgcagggtcgaccttggcagcagcgtccatgcgggc
cagacgttgctgcgtctcgacaacagcgattatgcgcgggcgctggacagcgcggcggcg
cagagcggttcggcccggaccgccgccgccgtgcagcaggctgatctggcgcggtcgcgc
gaattgctgaagcaaggcttcatttcccccgcagagttcgatcagcagaaggcggcggcc
gttcaggcgcaggcgcagttgcgtgccgccggcgcccagagcggaacggcatcggcgcag
ctgggccgcaccgtcctcacggcgccgcgcgccggcgtcgtcacgcagattcagggcgag
gttggtcaggtcgtgggcgcgggacaggcgatcgtgacgctggccgatccgtcccggccg
gaaatcgcggtggcgctcccggaaggcagtctggaccggatccggtccgcctcacgattg
agtgtgagcgtgtggagcagcccgggccggcgttatgctgccaggctccgcagcatatcg
ggcgctgccgatcctgcgacgcggacctttgcggcacgcctgtccgtcgatgcgccggca
caggcgctgctgatgggcgaaaccgccgaattgcgggtcgaaggcgatgccggcgatgcc
gccgtccgcgtgccgctgaccgccgtgctgcaatccaacggacgcgcgcaggcttgggta
ctcgaccggcgaacgatggtggtgcagccgcgcgccgtgcagatcggcgcggcgcagggc
gacatgctgaccatccggtccggcctgaaaccgggcgagaccatcgtcacggccggggtg
catctgctgcgtgcgggcgagaaggttcgtatcgtgcaggtgccgcagtcatga
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