Sphingobium sp. YG1: YGS_C3P0143
Help
Entry
YGS_C3P0143 CDS
T05858
Name
(GenBank) putative ATP-dependent endonuclease of the OLD family
Organism
spyg
Sphingobium sp. YG1
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OLD-like_TOPRIM
AAA_21
AAA_15
SMC_N
Motif
Other DBs
NCBI-ProteinID:
BBD03620
LinkDB
All DBs
Position
pYGP1:171947..173758
Genome browser
AA seq
603 aa
AA seq
DB search
MFSLDPAQRKIRTSDFHISSDEDPEDAPSTRDLWIEADFEFPELADADADEAEDGTMPAV
AGNFSHLQMETDDASVRIRFRLQASLDEDGDIEESFTHVMQVDDDGVPTVQGRVSKQDRA
AVQVHYLPARRNPADHISYAANALLGRALRAANWSAERQTISALTEQISAALVGNASVKG
IGDEVTKLWESLHKGKFYANPTLSFAQSEIENLLRHLSLSFAPGHGTPQVDFSRLSDGQQ
SLLYITLVLAMRAIGNAVLAGDTNAFDIDKLRPPLFTLVAVEEPENSLSPHYLGRVLRTL
SEFAEDGDAQAVIATHAPSLLRRVEPESIRYLRLDEERRTTVSRITMPSGAEAHKYVREA
IQAFPELYFARLLILGEGDSEEVVLPRLLAARGILADDASISVVPLGGRHVNHFWRLLSD
LGIPFVTLLDLDLARHQGGWGRIKYAAKQLLRFQEDPVDFDEEGADAIPKWDSKQGLMLN
DDGWIATLEKNAVFFSSPLDLDFMMIEAFPDAYGLTDAELEDPDDGTIDAVLGKSHDALG
GQYDDAQQQLFGAYQERFKLGSKPSWHIRAMAKLDDDALLESMPEVLDRMFDRIEEKLAE
LPE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgttcagtctcgaccccgcgcagcgtaagatccgcacgtcggattttcacatctcatcg
gatgaagacccggaggacgcaccttcgacgcgagatctgtggattgaggccgacttcgag
ttccccgagttagccgatgccgatgccgatgaggcagaggacggcacaatgccggccgtc
gcaggcaacttctcccatctccagatggaaacagacgacgcgtcggttcgaattcgcttc
cgcctccaagccagcctcgacgaggacggggacatcgaagaaagcttcacccatgtgatg
caggtcgatgatgatggagttccaaccgtccaaggcagggtttccaagcaggaccgggcc
gcggtgcaggtccattacctgccagctcggcgcaatcccgcagaccatatctcttacgcc
gccaacgctttgctcggccgcgcacttcgtgccgccaactggtcggcggagcgccagacg
atctcggctctcacggagcagatcagcgcagcgctcgtcggcaacgcgtcggttaagggg
atcggtgatgaggtcaccaagctctgggaatcgcttcacaagggaaaattttacgccaat
ccgactctgtcgttcgctcagagcgaaatcgaaaatttgctgcggcatctcagcctgagc
ttcgcgcccggtcacggtacgccgcaggtcgacttctcccgactaagcgacggtcagcaa
tccctgctgtacattacgctcgttctcgcgatgcgggccatcggcaatgcagtgctagcc
ggcgacaccaatgcattcgacatcgacaagctgcgcccaccgcttttcacactcgtggcg
gtcgaagagcccgagaacagcctgtccccgcactatcttggtcgcgttctacggacgctg
agcgagttcgcggaagacggcgatgcacaagccgttatcgcgacccatgctccctcgctg
ctgcgccgcgtcgaaccggagagcatccgctacctgcgcctcgacgaggagcggcgcact
acggtgtcccggatcactatgccaagcggggccgaagcgcacaaatatgtccgggaagcg
atccaagcctttcccgagctctacttcgcgagactgctgatcctaggcgagggagacagc
gaggaggtggtgttgccacgtttgctcgcggcgcgtggtatcctggccgacgatgcctcg
atctcggtcgttccgctgggtggacggcacgtgaaccatttctggcgcctgctgagcgat
ctcggcattccattcgtaacgttgctggatctcgacctcgcgcgccaccagggtggctgg
ggccggatcaaatacgcggcgaagcagctgctgcgattccaggaagacccggtggatttc
gatgaggaaggtgcggacgcgattcccaagtgggacagcaagcaaggcctgatgctcaac
gacgatggctggatcgccacgctggaaaagaatgcggtgttcttttcctctccgctcgac
ctcgacttcatgatgatcgaggcgtttcccgacgcctatggcctgaccgatgccgaactc
gaggatccagacgacggcacgatcgacgccgtgctcggcaagtcacacgacgcgctcggc
ggtcaatatgacgatgcccagcagcaactgttcggggcgtatcaggaacgtttcaagctc
ggcagcaagccgagttggcacatccgggcgatggccaaactcgacgacgacgcgctgctc
gaaagcatgcccgaggttctcgaccgaatgttcgaccgcatcgaggagaagctcgcggaa
ttgccggaatga
DBGET
integrated database retrieval system
