Sphingobium sp. YG1: YGS_C3P0146
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Entry
YGS_C3P0146 CDS
T05858
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
spyg
Sphingobium sp. YG1
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spyg03032
]
YGS_C3P0146
03036 Chromosome and associated proteins [BR:
spyg03036
]
YGS_C3P0146
03400 DNA repair and recombination proteins [BR:
spyg03400
]
YGS_C3P0146
DNA replication proteins [BR:
spyg03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YGS_C3P0146
Chromosome and associated proteins [BR:
spyg03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
YGS_C3P0146
DNA repair and recombination proteins [BR:
spyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
YGS_C3P0146
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
DUF2267
Motif
Other DBs
NCBI-ProteinID:
BBD03623
UniProt:
A0A2Z6ANN0
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All DBs
Position
pYGP1:complement(176105..176380)
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AA seq
91 aa
AA seq
DB search
MNNAELADALAAANGLTKADARKAVDAVFAAITDAAAKGEEISINGFGKFKVKDTPEREG
RNPSTGAAITIAAAKKLGFTPAKAVKDRLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgctgaactggcagatgcactcgcagcagccaatggattgacgaaggccgac
gcgcgcaaagcggtcgacgctgtgttcgccgccattaccgacgcggcggcaaaaggcgag
gaaatctcgatcaatggtttcgggaagttcaaggtgaaggatacgccggagcgcgagggt
cgcaacccctcgaccggcgctgccatcaccatcgctgcggccaagaagctcgggttcacg
ccggccaaggccgtcaaggaccggttgaacggctaa
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