Streptococcus pyogenes HSC5 (serotype M14): L897_00665
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Entry
L897_00665 CDS
T02743
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
spyh
Streptococcus pyogenes HSC5 (serotype M14)
Pathway
spyh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spyh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L897_00665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spyh03021
]
L897_00665
03400 DNA repair and recombination proteins [BR:
spyh03400
]
L897_00665
Enzymes [BR:
spyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L897_00665
Transcription machinery [BR:
spyh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L897_00665
DNA repair and recombination proteins [BR:
spyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L897_00665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AGQ27020
LinkDB
All DBs
Position
99010..102651
Genome browser
AA seq
1213 aa
AA seq
DB search
MVDVNRFKSMQITLASPSKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIVCDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEPKSLLTEREYREKLQEYGHGSFVAKMGAEAIQDLL
KRVDLAAEIAELKEELKSASGQKRIKAVRRLDVLDAFNKSGNKPEWMVLNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVAKEYAGNVKAAKRMVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARLLMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEDAGREGEGMIFKDKDEAVMAYRNGYAHLHSRVGI
AVDSMPNKPWKDNQRHKIMVTTVGKILFNDIMPEDLPYLQEPNNANLTEGTPDKYFLEPG
QDIQEVIDGLDINVPFKKKNLGNIIAETFKRFRTTETSAFLDRLKDLGYYHSTLAGLTVG
IADIPVIDNKAEIIDAAHHRVEEINKAFRRGLMTDDDRYVAVTTTWREAKEALEKRLIET
QDSKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFS
THGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLIRAITDGKEVTETL
EERLQGRYTRKSVKHPETGEVLIGADQLITEDMARKIVDAGVEEVTIRSVFTCATRHGVC
RHCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASNTDITQGLPRIQE
IFEARNPKGEAVITEVKGNVVEIEEDASTRTKKVYVQGKTGMGEYVVPFTARMKVEVGDE
VNRGAALTEGSIQPKRLLEVRDTLSVETYLLAEVQKVYRSQGVEIGDKHVEVMVRQMLRK
VRVMDPGDTDLLPGTLMDISDFTDANKDIVISGGIPATSRPVLMGITKASLETNSFLSAA
SFQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNIEPQAMNEIEVIDHT
EVSAEAVFTAEAE
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
gtggttgacgtaaatcgttttaaaagtatgcaaatcacattagcctcaccaagtaaggtc
cgttcatggtcttatggtgaagttaaaaaacctgaaacaatcaactaccgtacattaaaa
ccagaacgtgaaggactctttgacgaagtcatctttggtccaacaaaagactgggaatgt
gcgtgtggtaagtacaaacgtatccgttataaagggatcgtttgtgaccgctgtggggtt
gaggtaactcgtgctaaagtacgtcgtgaacgtatgggtcacattgagttaaaagctcct
gtatcacatatctggtatttcaaagggattccatctcgtatgggattgactcttgatatg
agtcctcgtgcccttgaagaagtgatctattttgcggcttatgtggtcattgatccaaaa
gatacaccgcttgaaccaaaatcattattaacagaacgtgaataccgtgaaaaactacaa
gagtatggtcatgggtcatttgtcgctaagatgggtgctgaagccattcaagatctcttg
aaacgtgtggacttggcagctgaaatcgctgaattaaaagaagagttgaaatctgcttct
ggtcaaaaacggattaaagcagttcgtcgtttagatgtccttgatgcctttaacaaatct
ggaaataaaccagaatggatggttcttaacatcctgccggttattccaccagatcttcgt
ccgatggttcaattggatggtggtcgttttgcggcatcagacttgaatgacttgtaccgt
cgtgtgattaaccgtaacaaccgtttggcacgtttgttagaacttaatgcccctggcatc
attgttcaaaatgaaaaacgaatgcttcaagaagccgttgatgctttgattgataatggt
cgtcgtggtcgtccaatcactggaccaggtagtcgtccattgaaatcattgagccacatg
cttaaaggtaaacaagggcgtttccgtcaaaacttgcttggtaaacgtgtagacttctct
ggacgttccgttatcgctgttggtccgacccttaaaatgtatcaatgtggtgtcccacgt
gaaatggctatcgagctttttaaaccatttgtaatgcgcgaaattgttgccaaagaatat
gctggtaacgttaaagccgctaaacgtatggttgaacgtggcgacgaacgcatctgggat
atcttagaagaagttatcaaagaacacccagtcctacttaaccgcgcaccgactcttcac
agacttggtattcaggcttttgaacccgttcttattgacggtaaggcacttcgtcttcac
ccacttgtgtgtgaggcctacaatgccgacttcgatggagaccaaatggccattcacgtg
ccactttcagaagaagcacaagctgaagctcgtcttttgatgcttgctgcagagcacatc
ttgaaccctaaagatggtaaaccagttgttactccatctcaggatatggttcttggtaac
tactatcttacgatggaagatgctggtcgcgaaggcgaaggtatgatttttaaggataaa
gacgaagctgttatggcatatcgtaatggttatgctcatcttcatagtcgtgtgggtatc
gctgttgacagcatgccaaacaaaccttggaaagacaatcaaagacataaaatcatggtg
acaactgttggtaagattttgtttaacgatatcatgccagaggaccttccttacctccaa
gagccaaacaatgccaacttgacagaaggaacacctgataaatacttccttgaacctggt
caagacatccaagaagtgattgatggcttagacatcaatgtgccatttaagaagaaaaac
ctcggtaacatcattgcggaaaccttcaaacgtttccgtacaacagaaacatcagccttc
cttgaccgtttgaaagaccttggttactaccattcaacccttgccggtttgacagtgggt
atcgctgacatcccagttatcgataacaaagcagaaatcattgatgctgctcaccatcgt
gttgaagaaattaacaaagccttccgtcgtggtttgatgacagatgatgaccgttatgtt
gccgttacaacaacatggcgtgaagctaaagaagcccttgaaaaacgtctgattgaaaca
caagattctaagaacccaatcgttatgatgatggactcaggagctcgtggtaacatctct
aacttctcacagcttgcgggtatgcgtggtttgatggctgctcctaacggacgcatcatg
gaacttcctatcttgtcaaacttccgtgaaggtttgagcgttttggaaatgttcttctca
acccacggtgcacgtaaagggatgaccgatacggcccttaaaacagccgactcaggttat
cttactcgtcgtttggttgacgttgcccaagatgttatcattcgtgaggacgattgtggc
actgatcgcggtcttcttatccgtgctattacagatggtaaagaagttaccgaaacgctt
gaagagcgtcttcaaggtcgttacacacgtaaatcagtcaaacaccctgaaactggtgaa
gtcttgattggtgctgaccaattaatcactgaagacatggctcgtaagattgttgatgca
ggtgttgaagaagtgaccattcgttctgtctttacctgtgcgactcgtcatggagtttgc
cgtcactgttatggtatcaacttggcaactggtgatgctgttgaagtgggtgaagcagtt
ggtactattgctgcccaatctatcggtgagcctggtactcagcttaccatgcgtaccttc
cacacgggtggtgtagcctcaaataccgatatcacacagggtcttcctcgtattcaagag
atctttgaagcacgtaatcctaaaggggaagcggtcattactgaagtgaaagggaatgtt
gtcgagattgaagaagatgcgtcaactcgtaccaagaaagtctacgttcaaggtaaaact
ggcatgggcgaatatgtcgtaccatttacagcacgtatgaaagttgaagttggcgacgaa
gttaatcgcggagctgcccttacagaagggtcaatccaaccgaaacgtctccttgaagtg
cgtgataccttgtcagttgaaacgtaccttcttgcagaagtacaaaaagtttaccgtagc
caaggggtagaaatcggagacaaacacgttgaggtaatggttcgccaaatgcttcgtaaa
gttcgtgtcatggatccaggtgatacagacctccttccaggtacacttatggatatttct
gattttacagatgctaacaaagatattgttatctctggtggtattcctgcgacatctcgt
cctgttcttatgggtattactaaggcttcccttgaaaccaattccttcttatcagctgca
tccttccaagaaacaactcgtgttcttacagatgctgctatccgtggtaagaaagaccac
ttacttggtcttaaagaaaatgttatcattggtaaaatcattccagctggtactggtatg
gcgcgctaccgtaacattgaaccacaagcgatgaatgagattgaagtgattgatcataca
gaagtctcagcagaagccgtttttacagcagaagcagaataa
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