Streptococcus pyogenes M1 476 (serotype M1): M1GAS476_0469
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Entry
M1GAS476_0469 CDS
T02499
Name
(GenBank) exoribonuclease II
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
spym
Streptococcus pyogenes M1 476 (serotype M1)
Pathway
spym03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spym00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M1GAS476_0469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spym03019
]
M1GAS476_0469
03016 Transfer RNA biogenesis [BR:
spym03016
]
M1GAS476_0469
Enzymes [BR:
spym01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
M1GAS476_0469
Messenger RNA biogenesis [BR:
spym03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M1GAS476_0469
Transfer RNA biogenesis [BR:
spym03016
]
Prokaryotic type
tRNA degradation factors
M1GAS476_0469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
RNase_II_C_S1
S1_RRP5
OB_HELZ2
Motif
Other DBs
NCBI-ProteinID:
BAM29803
LinkDB
All DBs
Position
1:424574..426907
Genome browser
AA seq
777 aa
AA seq
DB search
MMKERIMTYLKEHGKSNVNDLAAALEMAGAKHFPSLIKTISKMESQSLLRFSDDGSLALR
KEREKKKEPTVQGVFRANKAGFGFLHVDENEDDMFIGRNDVGYAIDGDTVEVVVKKPADR
LKGTAAEAKVVAIVDRSLKTAVGTFILDDDKPKYAGYIRSKNQKIQQKIYIKKEPVVLKG
TEIIKVDIDKYPIRGHDYFVASVRDIVGHQGDVGIDVLEVLESMDIVSEFPAEVLAEANA
ISEAPTAKDLIGRVDLRQETTITIDGADAKDLDDAIHIKLLDNGNYELGVHIADVSYYVT
EGSALDKEAIARGTSVYVTDRVVPMLPERLSNGICSLNPNIDRLTQSALMEINSQGHVVN
YQICQSVIKTTYRMTYSTVNDMIAGDEEALQEFASIADDVTLMVALHRILEAMRSKRGAL
NFDTQEAKIIVNDKGMPVDVVLRQRGIAERMIESFMLAANECVAEHFAKAKLPFIYRIHE
EPKAEKLQQFIDYASTFGIHIQGTANKISQEALQAFMAKVEGQPGAEVLNMMLLRSMQQA
RYSEHNHGHYGLAAEYYTHFTSPIRRYPDLLVHRMVREYNQPSQEKRDHFAQIIPELATS
SSQLERRAIDAERVVEAMKKAEYMAEYVGEEFDGIVSSVVKFGFFVELPNTIEGLVHITS
LPEYYHFNERTLSLQGEKSGKVFKVGQPIRVKLVKADKETGDIDFEYLPSDFDVVEKIKM
SDKASRRDRRKSSKSSKGTKKKEPKEVAKAKTKGKTKKGSKKPFYKEQAKKKSRKRS
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaagaaagaattatgacttacctcaaggagcatggcaagtccaatgtgaacgac
ttggctgcggccttggagatggctggagctaagcattttcccagccttattaaaaccatt
tccaaaatggaaagtcagagcctgttacggttttcagatgatggcagtctggctcttaga
aaagagcgtgaaaagaaaaaagaacctactgttcagggtgtttttcgtgccaataaagca
ggctttggtttcttacatgtggatgagaatgaagatgacatgtttatcggtcgtaatgat
gttgggtatgctattgatggtgatactgtcgaagtagtggttaaaaagccagcagaccgt
ctcaaaggcacagcggctgaagctaaggtcgttgctattgttgaccgttctttaaaaaca
gctgttggaacctttattttagatgatgacaaaccaaaatatgctggttatatcaggtcc
aaaaaccaaaagattcaacaaaaaatctatatcaaaaaagaacctgttgtgcttaaaggc
actgaaatcatcaaggttgatattgataaatacccgatacgcgggcacgattattttgta
gccagtgtgcgtgatatcgtaggccatcaaggagacgttggaattgatgtcctagaagtc
cttgaatcgatggatatcgtgtcagaatttccagcagaagttttagctgaggccaatgct
atttcagaagcaccaactgctaaagatttaataggccgtgtggatttgcgtcaagaaacc
accattactattgatggtgcggacgccaaagacttagatgatgctatccatattaagcta
ttggataacgggaattatgaacttggggtacatattgcggatgtctcatattatgtgaca
gaaggatctgcccttgataaggaagctatcgcccgtggcacttctgtctatgtcaccgat
cgtgtggttccgatgttaccagagcgtttgtcaaatggcatctgctctttgaaccctaac
attgatcgtttgacccagtcagccttgatggaaattaattctcaagggcatgtggtcaat
tatcaaatctgtcaatcagtgattaagacaacttaccgaatgacgtatagtacggtcaat
gacatgattgcaggagatgaagaagcgctccaagaattcgctagcattgctgatgatgtg
accctcatggtggctttgcataggattttggaagctatgcggtcaaaacgaggcgccttg
aattttgatacgcaagaagcaaaaattattgttaatgacaaaggaatgccggttgatgtg
gtgcttcgtcaaaggggcattgcggagcggatgattgaatcctttatgctagcagccaat
gagtgtgttgcggagcattttgcaaaagctaagttaccgtttatctaccgtattcacgaa
gaaccaaaggccgaaaaacttcaacaatttattgattacgctagcacctttggtattcac
attcaaggaacagccaacaagatttctcaggaagccttgcaagcctttatggcaaaagtc
gaaggtcaaccaggagcagaagtgctcaacatgatgcttctacgttccatgcaacaagcg
aggtattctgaacataatcatggccattacggtttggccgcagaatattacactcacttt
accagtccgattcgtcgttaccctgacttattggttcaccgcatggttcgtgagtacaat
caacctagtcaagaaaagcgcgaccattttgctcagatcattccagaattagcaacatct
tcttcacagttagagcgtcgtgctattgatgctgaacgcgtggttgaagccatgaaaaaa
gctgagtatatggcagagtatgtcggcgaagaatttgacggtatcgtttccagtgtcgtt
aaatttggtttttttgtagaattgccaaatacgattgaaggtttggttcatatcactagc
ttaccggaatactatcactttaatgaaagaacgctaagccttcaaggtgaaaaatcaggt
aaggtctttaaggtcggtcaacctattcgtgtgaaattggttaaggctgacaaggaaact
ggtgacattgactttgagtatttacctagcgactttgatgtggttgaaaaaatcaagatg
tcggataaagctagtcgacgagatcgccgtaaatcctcaaaatcatctaaagggacaaag
aaaaaagaacctaaagaagtagccaaggcaaaaaccaagggtaaaactaaaaaagggtct
aaaaaaccattttacaaagaacaagcaaaaaagaagagtcgtaaaaggagttaa
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