Streptococcus pyogenes STAB901 (serotype M44): STAB901_08085
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Entry
STAB901_08085 CDS
T03472
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
spyo
Streptococcus pyogenes STAB901 (serotype M44)
Pathway
spyo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spyo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
STAB901_08085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spyo03019
]
STAB901_08085
03016 Transfer RNA biogenesis [BR:
spyo03016
]
STAB901_08085
Enzymes [BR:
spyo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
STAB901_08085
Messenger RNA biogenesis [BR:
spyo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
STAB901_08085
Transfer RNA biogenesis [BR:
spyo03016
]
Prokaryotic type
tRNA degradation factors
STAB901_08085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
S1_2
OB_RRP5_4th
SPATA25
Motif
Other DBs
NCBI-ProteinID:
AIG50865
LinkDB
All DBs
Position
complement(1565893..1568025)
Genome browser
AA seq
710 aa
AA seq
DB search
MSKQTFTTTFAGKPLVVDVGQVAKQANGATVVRYGDSTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
NASAPMAAMFGSSLALSISDIPFNGPIAGVQVGYIDGEFIINPDKEQMEASLLELTVAGS
KEAINMVESGAKELSEDIMLEALLKGHQAIQELIAFQEQIVAVVGKEKAEVELLQVDADL
QVDIVAKYNAQLQKAVQVEEKKAREAATEAVKEMVKAEYEERYAEDENLATIMRDVAEIL
EQMEHAEVRRLITEDKIRPDGRKIDEIRPLDAVVDFLPKVHGSGLFTRGQTQALSILTLA
PMGETQIIDGLAPEYKKRFLHHYNFPQYSVGETGRYGAAGRREIGHGALGERALEQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGTNYTV
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIAGITPQILEEALAQAKKARFEILDVI
EATIAEPRPELAPTAPKIDTIKIDVDKIKVVIGKGGETIDKIIAETGVKIDIDDEGNVSI
YSSDQAAINRTKEIIAGLVREAKVGEVYHAKVVRIEKFGAFVNLFDKTDALVHISEIAWT
RTTNVSDVLEVGEDVDVKVIKIDEKGRVDASMKALIPRPPKPEKKEEKHD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaaacctttacaacaacatttgcagggaaaccccttgttgttgatgttggt
caagtcgctaagcaagccaatggggcaaccgttgttcgttatggcgactcaactgtccta
accgcagctgttatgtctaagaaaatggcaacgggtgatttcttccctcttcaagttaat
tacgaagaaaaaatgtatgctgctggtaaattcccaggaggtttcatgaaacgtgaggga
cgcccttcaacagatgcgaccttgacagctcgcttgattgaccgcccgattcgtcccatg
tttgccgagggttttcgtaacgaagtacaagtgattaacactgtcctttcttatgatgaa
aatgctagcgctccaatggcagcgatgtttggctcatctctggccttgtccatctcagat
attccatttaatggaccgattgcaggtgttcaagttggctatattgatggcgagttcatc
atcaacccagataaagaacaaatggaagcgtcgctcttagaattaaccgttgctggtagc
aaagaagccatcaatatggttgagtctggtgccaaagaattatcagaagacatcatgctt
gaggctcttttaaaaggtcaccaagctattcaagaattaattgccttccaagaacaaatc
gtagccgttgttggtaaagaaaaagctgaggttgaactgttacaggttgatgcagactta
caagttgatattgtagctaagtacaatgctcaactgcaaaaagctgttcaagttgaagag
aaaaaagcgcgtgaagcagccacagaagccgttaaagaaatggttaaggctgagtacgaa
gagcgttacgcagaagacgaaaacctagcaaccattatgcgtgacgtggcagaaatcctt
gaacaaatggagcatgctgaagtgcgccgcctcattacagaggacaagattcgtcctgac
ggtcgtaagattgacgaaattcgtccgcttgatgctgtggttgacttcttgccaaaggtc
catggatcaggtctttttacgcgcggtcaaactcaggcgctatcaattttgaccttggca
ccaatgggagaaactcaaatcattgatggtctggccccagagtacaaaaaacgcttcttg
catcactacaatttcccgcaatattcagttggtgaaacgggtcgttacggagctgctggt
cgtcgtgaaattggacacggtgccttaggtgaacgcgctcttgaacaagtcttgccaagc
ttagaagagtttccttatgccattcgtttagttgccgaagttctagaatctaacggttcg
tcttctcaggcttctatctgtgctggtacccttgctctgatggctggtggtgtaccaatc
aaggctcctgtggcagggattgccatgggtctcatttcagacgggacgaattatacagtc
ttgaccgatatccaaggtcttgaagaccactttggagatatggactttaaagtggcagga
actcgtgaagggattacagcccttcaaatggatattaagattgcagggattacgcctcaa
atcctagaagaagctcttgcacaagctaaaaaagctcgctttgaaatccttgatgtgatt
gaagcaactatcgctgaaccacgtcccgagttagccccaactgcaccgaaaattgacacc
atcaagattgacgtagacaaaatcaaagtggttatcggtaaaggtggcgaaaccattgat
aagattattgccgaaacgggtgtcaaaattgatattgatgacgaaggaaatgtctctatc
tactcaagtgaccaagctgccattaaccgcactaaagaaatcatcgctggcctagtacgt
gaagctaaggtaggcgaagtttaccatgctaaggttgtccgtattgagaaatttggtgcc
tttgtcaacctctttgacaagacagatgcacttgttcacatttctgaaattgcttggact
agaacgaccaacgtgtcagatgtccttgaagtgggtgaagacgttgatgttaaggtcatt
aagattgatgagaagggtcgtgtggatgcctcaatgaaagctttgattccacgcccacca
aaaccagagaaaaaagaagaaaaacatgactaa
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