Streptococcus pyogenes MGAS5005 (serotype M1): M5005_Spy0083
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Entry
M5005_Spy0083 CDS
T00262
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
spz
Streptococcus pyogenes MGAS5005 (serotype M1)
Pathway
spz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
spz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M5005_Spy0083 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spz03021
]
M5005_Spy0083 (rpoB)
03400 DNA repair and recombination proteins [BR:
spz03400
]
M5005_Spy0083 (rpoB)
Enzymes [BR:
spz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M5005_Spy0083 (rpoB)
Transcription machinery [BR:
spz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M5005_Spy0083 (rpoB)
DNA repair and recombination proteins [BR:
spz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M5005_Spy0083 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AAZ50702
UniProt:
Q9A1U1
LinkDB
All DBs
Position
94171..97737
Genome browser
AA seq
1188 aa
AA seq
DB search
MAGHEVRYGKHRTRRSFSRIKEVLDLPNLIEIQTDSFQDFLDSGLKEVFEDVLPISNFTD
TMELEFVGYEFKEPKYTLEEARIHDASYSAPIFVTFRLVNKETGEIKTQEVFFGDFPIMT
EMGTFIINGGERIIVSQLVRSPGVYFNDKVDKNGKVGYGSTVIPNRGAWLELETDSKDIA
YTRIDRTRKIPFTTLVRALGFSGDDEIVDIFGESDLVRNTIEKDIHKNPSDSRTDEALKE
IYERLRPGEPKTADSSRSLLIARFFDARRYDLAAVGRYKVNKKLNIKTRLLNQIIAENLV
DAETGEILVEAGTEMTRSVIESIEEHLDGDLNKFVYTPNDYAVVTEPVVLQKFKVVSPID
PDRVVTIVGNANPDDKVRALTPADILAEMSYFLNLAEGLGKVDDIDHLGNRRIRAVGELL
ANQFRIGLARMERNVRERMSVQDNDVLTPQQIINIRPVTAAVKEFFGSSQLSQFMDQHNP
LSELSHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSFGH
LNKYGFIQTPYRKVDRATGTVTNEIVWLTADEEDEYTVAQANSKLNEDGTFAEEIVMGRH
QGNNQEFSASVVDFVDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLIDPKAP
YVGTGMEYQAAHDSGAAVIAQQNGKVVFSDAEKVEIRRQDGSLDVYHITKFRRSNSGTAY
NQRTLVKVGDIVEKGDFIADGPSMENGEMALGQNPVVAYMTWEGYNFEDAVIMSERLVKE
DVYTSVHLEEFESETRDTKLGPEEITREIPNVGEEALKDLDEMGIIRIGAEVKEGDILVG
KVTPKGEKDLSAEERLLHAIFGDKSREVRDTSLRVPHGGDGIVRDVKIFTRANGDELQSG
VNMLVRVYIAQKRKIKVGDKMAGRHGNKGVVSRIVPVEDMPYLPDGTPVDIMLNPLGVPS
RMNIGQVMELHLGMAARNLGIHIATPVFDGASSEDLWDTVREAGMDSDAKTVLYDGRTGE
PFDNRVSVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGASNVLQEILTYKSDDVTGRLKAYEAITKGKPIPKPGVPESFRVLVKELQSLGLDMRV
LDEDDNEVELRDLDEGEDDDIMHVDDLEKAREKQAQETQEVSETTDEK
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgaagttcgatacggaaaacaccgtacacgtcgtagcttttcaagaatc
aaagaagttcttgatttaccaaatttgattgaaattcaaactgactcattccaagatttc
ctcgattcaggtttgaaagaagtatttgaagatgtacttcctatttcaaactttacggat
actatggaacttgaatttgttggttacgaatttaaagaacctaaatatacccttgaagaa
gctcgtatccacgatgcaagttattctgcaccaatctttgttaccttccgtttggtcaat
aaagaaactggtgagattaaaactcaagaagtcttctttggtgatttcccaatcatgacg
gaaatgggtacctttattatcaatggtggtgaacgtatcatcgtttctcagttggtgcgt
tctccaggtgtttatttcaacgataaagttgataaaaacggtaaagttggttacggatca
acagtgattcctaaccgtggggcttggttggaattagagactgactcaaaagacattgcc
tacactcgtattgaccgtacccgtaagattccattcacaaccttggttcgtgcccttggt
ttctcaggtgatgatgaaattgttgatatctttggtgaaagcgaccttgttcgtaatacc
attgaaaaagacattcacaaaaatccaagtgattctcgtacagacgaagcccttaaagaa
atttacgagcgtcttcgtccaggtgagccaaaaactgcagatagctctcgtagtcttttg
attgcgcgtttctttgatgcacgtcgttacgatttggctgcggttggtcgttacaaagtg
aacaaaaaacttaatatcaagactcgtcttttgaaccaaatcattgctgaaaaccttgtg
gatgctgaaactggcgaaattttggtagaagctggaactgagatgactcgtagcgtcatc
gaatccatcgaagaacaccttgacggtgatttgaacaagtttgtttacacaccaaatgat
tacgctgtggttactgaaccagttgtccttcaaaagttcaaggttgtgtcaccaattgat
cctgatcgtgtagtaactattgttggtaatgccaatccagatgataaggttcgtgcattg
acacctgctgatattttggcagaaatgtcttacttcttgaaccttgctgaaggtcttgga
aaagttgacgatattgaccacttgggtaaccgtcgtatccgtgccgttggtgaattgctt
gccaaccaattccgcatcggtcttgctcgtatggagcgtaacgtgcgtgagcgtatgtct
gttcaagacaacgatgtgttaacaccacaacaaatcatcaatatccgtcctgtcacagca
gctgtcaaagaattcttcggttcgtctcagttgtcacagttcatggaccaacacaaccca
ttgtcagagttgtctcacaaacgtcgtttatctgccttaggacctggtggtttgacacgt
gaccgtgctggttatgaggttcgtgacgtgcattacacgcactatggccgtatgtgtccg
attgaaacacctgaaggaccaaacattggtttgattaataacttgtcttcatttggacat
cttaataaatatggtttcatccaaacaccttaccgtaaggttgaccgtgcgactggtacg
gtaactaacgagattgtttggttgactgccgacgaagaagacgaatacacagttgcacag
gccaattcgaaactaaacgaagatggcacttttgctgaagaaatcgttatgggtcgtcac
caaggtaataaccaagaattttctgcaagtgttgttgatttcgttgacgtttcccctaaa
caggtagttgctgttgcgacggcatgtattcctttcttggaaaacgatgactccaaccgt
gccctcatgggtgccaacatgcaacgtcaggctgtgccattgattgatccaaaagcacca
tatgttggtactggtatggaatatcaagctgcccatgactcaggcgctgcggtgattgct
cagcaaaatggtaaagttgtcttttctgatgctgaaaaagtggaaatccgtcgtcaagat
ggctcgcttgatgtttaccacattaccaaattccgtcgttcaaactcaggaacagcctat
aaccaacgcacccttgttaaagtaggagacattgttgaaaaaggtgatttcatcgctgat
ggaccttctatggaaaatggtgaaatggctcttggacaaaacccagtcgttgcttacatg
acttgggaaggttataactttgaggatgccgttatcatgagtgagcgccttgtgaaagaa
gatgtctacacatctgttcacttggaagaattcgaatctgaaacgcgtgatacaaaactt
ggccctgaagaaatcactcgggaaatcccaaatgttggtgaagaagccctcaaagacctt
gacgaaatgggcattatccgtatcggtgctgaggttaaagaaggcgacatcttagtaggt
aaagtcacacctaaaggtgaaaaagacctttctgctgaagaacgtttacttcacgccatc
tttggggataaatcgcgtgaagtgcgtgatacctcacttcgtgtccctcacggtggtgat
ggtatcgttcgtgatgtgaaaatctttacacgcgctaacggcgatgaattgcaatcaggt
gttaatatgcttgtgcgtgtttacatcgctcaaaaacgtaaaatcaaggtcggagataaa
atggccggtcgtcacggaaacaagggtgtcgtttcacgtattgtaccagttgaagacatg
ccataccttccagatggaacaccagttgacatcatgttgaaccctcttggggtgccatca
cggatgaatattggtcaggttatggaacttcaccttggtatggctgctcgtaatcttggt
attcacattgcaacacctgtctttgacggggcttcatcagaagacctttgggacactgtt
cgtgaagctggtatggatagcgatgctaagacggtcctttatgatggtcgcaccggtgaa
ccatttgacaaccgtgtatccgttggtgtcatgtatatgatcaaacttcaccacatggtt
gatgataaacttcatgcccgttctgtaggaccatactcacttgttacccaacagccactt
ggtggtaaagctcaatttggtggacaacgttttggtgagatggaggtttgggcccttgaa
gcttatggtgcatcaaatgttcttcaagaaatcttgacctacaagtcagatgacgtcaca
ggacgtttgaaagcctatgaagcgattactaaaggtaaaccaattccaaaaccaggtgta
ccagaatccttccgtgttcttgtaaaagaattgcaatcgcttggtcttgatatgcgtgtg
cttgacgaggatgataatgaagtggaacttcgtgatcttgatgaaggtgaagacgatgac
attatgcatgttgacgatctcgagaaggcacgtgaaaaacaagctcaagaaactcaagaa
gtttctgaaacaactgacgaaaaataa
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integrated database retrieval system
