Streptococcus pyogenes MGAS5005 (serotype M1): M5005_Spy0414
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Entry
M5005_Spy0414 CDS
T00262
Name
(GenBank) exoribonuclease II
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
spz
Streptococcus pyogenes MGAS5005 (serotype M1)
Pathway
spz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M5005_Spy0414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spz03019
]
M5005_Spy0414
03016 Transfer RNA biogenesis [BR:
spz03016
]
M5005_Spy0414
Enzymes [BR:
spz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
M5005_Spy0414
Messenger RNA biogenesis [BR:
spz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M5005_Spy0414
Transfer RNA biogenesis [BR:
spz03016
]
Prokaryotic type
tRNA degradation factors
M5005_Spy0414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
RNase_II_C_S1
S1_RRP5
OB_HELZ2
Motif
Other DBs
NCBI-ProteinID:
AAZ51032
LinkDB
All DBs
Position
405834..408164
Genome browser
AA seq
776 aa
AA seq
DB search
MKERIMTYLKEHGKSNVNDLAAALEMAGAKHFPSLIKTISKMESQSLLRFSDDGSLALRK
EREKKKEPTVQGVFRANKAGFGFLHVDENEDDMFIGRNDVGYAIDGDTVEVVVKKPADRL
KGTAAEAKVVAIVDRSLKTAVGTFILDDDKPKYAGYIRSKNQKIQQKIYIKKEPVVLKGT
EIIKVDIDKYPIRGHDYFVASVRDIVGHQGDVGIDVLEVLESMDIVSEFPAEVLAEANAI
SEAPTAKDLIGRVDLRQETTITIDGADAKDLDDAIHIKLLDNGNYELGVHIADVSYYVTE
GSALDKEAIARGTSVYVTDRVVPMLPERLSNGICSLNPNIDRLTQSALMEINSQGHVVNY
QICQSVIKTTYRMTYSTVNDMIAGDEEALQEFASIADDVTLMVALHRILEAMRSKRGALN
FDTQEAKIIVNDKGMPVDVVLRQRGIAERMIESFMLAANECVAEHFAKAKLPFIYRIHEE
PKAEKLQQFIDYASTFGIHIQGTANKISQEALQAFMAKVEGQPGAEVLNMMLLRSMQQAR
YSEHNHGHYGLAAEYYTHFTSPIRRYPDLLVHRMVREYNQPSQEKRDHFAQIIPELATSS
SQLERRAIDAERVVEAMKKAEYMAEYVGEEFDGIVSSVVKFGFFVELPNTIEGLVHITSL
PEYYHFNERTLSLQGEKSGKVFKVGQPIRVKLVKADKETGDIDFEYLPSDFDVVEKIKMS
DKASRRDRRKSSKSSKGTKKKEPKEVAKAKTKGKTKKGSKKPFYKEQAKKKSRKRS
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaagaattatgacttacctcaaggagcatggcaagtccaatgtgaacgacttg
gctgcggccttggagatggctggagctaagcattttcccagccttattaaaaccatttcc
aaaatggaaagtcagagcctgttacggttttcagatgatggcagtctggctcttagaaaa
gagcgtgaaaagaaaaaagaacctactgttcagggtgtttttcgtgccaataaagcaggc
tttggtttcttacatgtggatgagaatgaagatgacatgtttatcggtcgtaatgatgtt
gggtatgctattgatggtgatactgtcgaagtagtggttaaaaagccagcagaccgtctc
aaaggcacagcggctgaagctaaggtcgttgctattgttgaccgttctttaaaaacagct
gttggaacctttattttagatgatgacaaaccaaaatatgctggttatatcaggtccaaa
aaccaaaagattcaacaaaaaatctatatcaaaaaagaacctgttgtgcttaaaggcact
gaaatcatcaaggttgatattgataaatacccgatacgcgggcacgattattttgtagcc
agtgtgcgtgatatcgtaggccatcaaggagacgttggaattgatgtcctagaagtcctt
gaatcgatggatatcgtgtcagaatttccagcagaagttttagctgaggccaatgctatt
tcagaagcaccaactgctaaagatttaataggccgtgtggatttgcgtcaagaaaccacc
attactattgatggtgcggacgccaaagacttagatgatgctatccatattaagctattg
gataacgggaattatgaacttggggtacatattgcggatgtctcatattatgtgacagaa
ggatctgcccttgataaggaagctatcgcccgtggcacttctgtctatgtcaccgatcgt
gtggttccgatgttaccagagcgtttgtcaaatggcatctgctctttgaaccctaacatt
gatcgtttgacccagtcagccttgatggaaattaattctcaagggcatgtggtcaattat
caaatctgtcaatcagtgattaagacaacttaccgaatgacgtatagtacggtcaatgac
atgattgcaggagatgaagaagcgctccaagaattcgctagcattgctgatgatgtgacc
ctcatggtggctttgcataggattttggaagctatgcggtcaaaacgaggcgccttgaat
tttgatacgcaagaagcaaaaattattgttaatgacaaaggaatgccggttgatgtggtg
cttcgtcaaaggggcattgcggagcggatgattgaatcctttatgctagcagccaatgag
tgtgttgcggagcattttgcaaaagctaagttaccgtttatctaccgtattcacgaagaa
ccaaaggccgaaaaacttcaacaatttattgattacgctagcacctttggtattcacatt
caaggaacagccaacaagatttctcaggaagccttgcaagcctttatggcaaaagtcgaa
ggtcaaccaggagcagaagtgctcaacatgatgcttctacgttccatgcaacaagcgagg
tattctgaacataatcatggccattacggtttggccgcagaatattacactcactttacc
agtccgattcgtcgttaccctgacttattggttcaccgcatggttcgtgagtacaatcaa
cctagtcaagaaaagcgcgaccattttgctcagatcattccagaattagcaacatcttct
tcacagttagagcgtcgtgctattgatgctgaacgcgtggttgaagccatgaaaaaagct
gagtatatggcagagtatgtcggcgaagaatttgacggtatcgtttccagtgtcgttaaa
tttggtttttttgtagaattgccaaatacgattgaaggtttggttcatatcactagctta
ccggaatactatcactttaatgaaagaacgctaagccttcaaggtgaaaaatcaggtaag
gtctttaaggtcggtcaacctattcgtgtgaaattggttaaggctgacaaggaaactggt
gacattgactttgagtatttacctagcgactttgatgtggttgaaaaaatcaagatgtcg
gataaagctagtcgacgagatcgccgtaaatcctcaaaatcatctaaagggacaaagaaa
aaagaacctaaagaagtagccaaggcaaaaaccaagggtaaaactaaaaaagggtctaaa
aaaccattttacaaagaacaagcaaaaaagaagagtcgtaaaaggagttaa
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