Sphingosinithalassobacter tenebrarum: G5C33_00570
Help
Entry
G5C33_00570 CDS
T06464
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
spzr
Sphingosinithalassobacter tenebrarum
Brite
KEGG Orthology (KO) [BR:
spzr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spzr03016
]
G5C33_00570
Enzymes [BR:
spzr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
G5C33_00570
Transfer RNA biogenesis [BR:
spzr03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G5C33_00570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QIG78433
UniProt:
A0A6G6Y1E8
LinkDB
All DBs
Position
109089..109709
Genome browser
AA seq
206 aa
AA seq
DB search
MSVFFHEEDLPEGVFAPGTSLAVDTETMGLITPRDRLCLVQISDGGGDEHLVRFGPESDY
AAPNLRAVLADPARLKLYHFARFDLAAIEHYLGVTAAPVYCTKIASRLIRTYTDRHGLKE
LVRELLGEEISKQQQSSDWGAPEITEAQRDYAASDVRFLHAMKTELDKRLVREGRMELAQ
SCFDFLPARARLDLAGWPEVDIFAHA
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtattttttcacgaagaagatttgcccgaaggcgtgttcgcaccgggcacctcg
ctggccgtcgataccgagacgatgggcctgatcacgccgcgcgaccggctgtgcctcgtc
cagatctccgatggcggcggcgacgagcatctcgtccgcttcggacccgaaagcgattat
gccgcgcccaatctgcgcgcggtgcttgccgatccggcccggctcaaactttatcatttc
gcgcgcttcgatcttgccgcaatcgaacattatctgggtgtcaccgcagcgccggtctat
tgcaccaagatcgcctcgcggctgatccgcacctacaccgaccggcacggcctgaaggag
ctggtgcgcgagctgctcggcgaggaaatctccaagcagcagcaatcctccgactggggt
gcacccgaaatcaccgaggcgcagcgcgactatgccgcatccgacgtgcgcttccttcac
gcgatgaagacggaactcgacaagcggctcgtgcgtgaaggacgtatggaactcgcccag
tcctgtttcgatttcctccccgcccgcgcgcggctcgatcttgccggatggccggaggtc
gatatcttcgcgcatgcatga
DBGET
integrated database retrieval system
