Stakelama tenebrarum: G5C33_01235
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Entry
G5C33_01235 CDS
T06464
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
spzr
Stakelama tenebrarum
Pathway
spzr03030
DNA replication
spzr03430
Mismatch repair
spzr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spzr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G5C33_01235 (holA)
03430 Mismatch repair
G5C33_01235 (holA)
03440 Homologous recombination
G5C33_01235 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spzr03032
]
G5C33_01235 (holA)
03400 DNA repair and recombination proteins [BR:
spzr03400
]
G5C33_01235 (holA)
Enzymes [BR:
spzr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G5C33_01235 (holA)
DNA replication proteins [BR:
spzr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G5C33_01235 (holA)
DNA repair and recombination proteins [BR:
spzr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G5C33_01235 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S6
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QIG78549
UniProt:
A0A6G6Y0X3
LinkDB
All DBs
Position
complement(236550..237563)
Genome browser
AA seq
337 aa
AA seq
DB search
MKASAAQMRAQLAGPDPKIRLFLLYGPDESGASDTGTRLAGAMGPDIEKIDINSKELKDS
PGRLADEAASLSLFGERRLIRIFGAEDSGVEAFRLLLDADAAENPVIATGPALKNSSKLV
KLAIASPLALAQAFYVPEGQDAARLAINIARDHGLRLTGDTAQQLASAAAGDRAILSREI
EKLALFLDAGPERPRDADALALEAIGADIGEPELFRTIETIVEGRVREIGDELTELNASG
GSGIPLLRMLTRRLITLAELRAQVDAGASIEQATEKTFFREKPATIRALKRWNSRQLAHA
INRARRVERDMMHGASAGEVLAEAECAAIARAAARMR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggccagcgccgcgcagatgcgggcgcagctggccggccccgatccgaaaatccgg
ctgttcctgctctacggccccgacgaatcgggagccagcgacacgggcaccaggctcgct
ggcgcgatgggcccggacattgagaaaatagatataaattccaaagagttaaaggatagt
ccggggcgactcgcggatgaagccgcttcgctttcgctgttcggcgaacggcggctgata
cggatcttcggcgcggaagacagcggcgtggaagcgttccggctgctgctcgatgccgac
gccgcggaaaatccggtgatcgccacagggccagcgctcaagaacagcagcaagctggtg
aagctggcgatcgcctcgccgctcgctctggcgcaggctttctacgttcccgaaggacag
gatgcggcgcgccttgcgatcaacatcgcgcgcgaccacggcctgcgcttgacgggggat
acggcccagcagctcgcttcggccgctgccggggatcgcgctattctttcccgcgaaatc
gaaaagctcgccctgtttctcgatgccggaccggagcggccgcgcgatgccgatgccctg
gcgcttgaagcgataggggccgatattggtgaacccgaactgttccgcacgatcgaaacg
attgtcgaagggcgggttcgcgagatcggcgatgaactaaccgagctgaatgcaagcggc
ggatcgggcattcccctgcttcgcatgctgacgcgccgattgatcacactggccgaattg
cgcgctcaggtcgatgcgggcgcatcgatcgaacaagcgaccgaaaagaccttcttccgt
gaaaagccggcgaccattcgcgcactcaaacgctggaacagccggcaattggcgcacgcg
atcaatcgcgcgcgccgggtcgagcgggacatgatgcatggcgcgagcgccggcgaagtg
ctcgccgaagccgaatgcgcggcgatcgcacgcgcggcggcgcgcatgcgctga
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