Stakelama tenebrarum: G5C33_03980
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Entry
G5C33_03980 CDS
T06464
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spzr
Stakelama tenebrarum
Pathway
spzr00061
Fatty acid biosynthesis
spzr00071
Fatty acid degradation
spzr01100
Metabolic pathways
spzr01212
Fatty acid metabolism
spzr02024
Quorum sensing
spzr04146
Peroxisome
Module
spzr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spzr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
G5C33_03980
00071 Fatty acid degradation
G5C33_03980
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
G5C33_03980
09145 Cellular community - prokaryotes
02024 Quorum sensing
G5C33_03980
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spzr01004
]
G5C33_03980
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spzr04147
]
G5C33_03980
Enzymes [BR:
spzr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
G5C33_03980
Lipid biosynthesis proteins [BR:
spzr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
G5C33_03980
Exosome [BR:
spzr04147
]
Exosomal proteins
Exosomal proteins of breast milk
G5C33_03980
Exosomal proteins of breast cancer cells
G5C33_03980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QIG79023
UniProt:
A0A6G6Y341
LinkDB
All DBs
Position
complement(785600..787396)
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AA seq
598 aa
AA seq
DB search
MKNRQLEHFDNLVSMFFTRARDKGDAPFLWAKQDGKWVSTSWAEAARQVASLATALQALG
LRRGDRVMLVAENRPEWCISDLAIMAAGCVTVPTYTTNTERDHVHIIENSGACAVIVSNA
KLARALMPAAVRSSSARMVIAIDEMRASQSGSMEYHQWHQLIADHPTDPDAVAARCTFRR
EDMACIIYTSGTGGAPRGVMQHHGAILHNCEGCCTIISEDFGWDDEVFLSFLPLSHAYEH
TGGQHFPISLGAQIYYSEGLEKLASNIEETRPTIMVVVPRLFEVLRTRITKAIEKQGNFQ
KRMLERAVAIGAKKAAGGVPLKDKPMELVINATLKPKIAKRFGGRIKAMVSGGAPLNPEV
GIFFDSLGLTFLQGYGQTEAAPVISCNRPSAGLKHDTVGPPMKGVEVHIADDGEILVRGE
LVMHGYWRNEEETDRVLRNGWLHTGDIGQIDNQGRIQITDRKKDIIVNDKGDNIAPQKVE
GMLTLQPEIMQAMIYGDRKPYMTAVLVPDPEWTQEWCAATGTPNDPAALAEDREYRATLN
RAVERVNKELSQIERIRRFILADEPFAIENQQLTPSLKIRRHVLREVYGERLTALYRG
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaggcagctcgaacatttcgacaatctcgtcagcatgttcttcacgcgcgcc
cgcgacaaaggcgatgcccccttcctctgggccaagcaggacggcaaatgggtgtcgacg
agctgggccgaggctgcgcgccaggtcgcctcgcttgccaccgcgctgcaggcgctgggg
cttcgccgcggcgatcgtgtgatgctggtcgccgaaaaccgtcccgaatggtgcatcagc
gacctcgcgatcatggcggcgggctgtgtcaccgtgccgacctacaccaccaacaccgaa
cgcgatcacgttcacatcatcgaaaattccggcgcctgcgcggtgatcgtttccaacgcc
aagctcgcccgcgcgctgatgcccgcggcagtgcgctcctcctcggcgcggatggtgatc
gcgatcgacgaaatgcgcgccagccagtcgggcagcatggaatatcaccaatggcatcag
ctgatcgccgatcacccgaccgacccggacgcagtggcggcgcgctgcaccttccggcgc
gaggacatggcctgcatcatctataccagcggcaccggcggcgcgccgcgcggggtgatg
cagcatcacggcgcgatcctgcacaattgcgagggctgctgcaccatcatctcggaggat
ttcggctgggacgacgaagtcttcctctccttcctcccgctcagccacgcctatgaacat
accggcgggcagcatttcccgatcagcctgggcgcgcagatctattattcggaagggctg
gaaaagctcgcatcgaatatcgaggagacgcggccgacgatcatggtcgtcgtcccgcgc
ctgttcgaagtgctgcgcacgcggatcaccaaggcgatcgagaaacagggcaatttccag
aaacggatgctcgagcgcgcggtggctataggcgctaagaaggcagcgggcggcgtgccg
ctgaaggacaagccgatggagctggtgatcaacgccacgctgaagccgaaaatcgccaag
cgtttcggcggacggatcaaggcgatggtttcgggcggcgcgccgctcaatcccgaagtc
ggcatctttttcgattcgctcgggctcaccttcctgcagggctatggccagaccgaagcc
gcgccggtgatttcctgcaatcgccccagcgcagggctgaagcacgacacggtcggtccg
ccgatgaagggcgtcgaagtgcatatcgccgatgacggcgagatactggtgcgcggcgag
ctggtgatgcacggctattggcgcaacgaggaggaaaccgatcgcgttctcaggaacgga
tggctccataccggcgatatcggccagatcgacaatcagggccgcatccagatcaccgac
cgcaagaaggacatcatcgtcaacgacaagggcgacaacatcgccccgcagaaggtggag
ggcatgctgacgctgcagcccgaaatcatgcaggccatgatctatggcgaccgcaagccc
tatatgaccgccgtgctggttcccgatcccgaatggacgcaggaatggtgcgcggcgacc
ggcacgcccaacgatcccgccgcgctggccgaggaccgcgaatatcgcgccacgctcaat
cgcgcggtcgagcgcgtgaacaaggaattgtcgcagatcgagcgtatccgccgcttcatc
ctcgccgacgaacccttcgcgatcgagaatcagcagctcacgccatcgctcaagatccgc
cgccacgtgctgcgcgaggtatatggcgaacggctgacggcgctctatcgcggctga
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