Sphingosinithalassobacter tenebrarum: G5C33_05015
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Entry
G5C33_05015 CDS
T06464
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
spzr
Sphingosinithalassobacter tenebrarum
Pathway
spzr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spzr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G5C33_05015 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spzr03400
]
G5C33_05015 (uvrA)
DNA repair and recombination proteins [BR:
spzr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G5C33_05015 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
G5C33_05015 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_21
nSTAND1
AAA_25
DnaJ_CXXCXGXG
ATPase
DUF4350
CbiA
Motif
Other DBs
NCBI-ProteinID:
QIG79214
UniProt:
A0A6G6Y2N8
LinkDB
All DBs
Position
complement(990565..993645)
Genome browser
AA seq
1026 aa
AA seq
DB search
MLTHINVRGAREHNLKGVDVDIPRDTLTVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLEMMQKPDVDHIEGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGVPY
SPATGLPISAQTVSQMVDRVLALPEGTRLLLLAPVVRGRKGEYRKELAEWQKAGFQRVRI
DGETYLIEEAPALDKKYKHDIEVVVDRLVVREDIATRLADSFETALKLADGLAYVDLVDA
TVAEISPLPLAGGAGGGRVNEAPQSFVADGDIPTPNPSRKREGNATGGNLKGAGIPDNRI
VFSEKFACPVSGFSIPEIEPRLFSFNAPQGACPACDGLGERLEFDEDLVVPNDQLSLKKG
AIVPWAKSNPPSPYYMQVLGSLAREYGFKLDTPWHELSEDIRHVILHGTSGIPVTLTFVD
GKKSYDVKKPFEGVIGNLNRRMLQTESAWRREELSKYQASHPCETCGGARLKPEALAVKI
AGQDIAYATRLSVVDALGWFKELPESLTGQQREIATAILKEIDERLGFLNNVGLDYLNLD
RTSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPSIGLHQRDNDMLLATLRRLRDLGNTV
LVVEHDEDAIRSADYILDMGPGAGVHGGTVVARGTLPEILATEGSVTADYLNGTRAIPVP
EKRRKGTGKKLTVHNATANNLTGVTAGIPLGTFTCITGVSGSGKSSFTIDTLYAAAARQL
NGARVLAGKHDKITGLEHLDKVIDIDQSPIGRTPRSNPATYTGAFTNIRDWFAGLPEAQA
RGYKPGRFSFNVKGGRCEACQGDGVLKIEMHFLPDVYVECDVCHGARYNRETLEVKFKGK
SIADVLDMTVEDAVEFFKAVPPIRDKMAMLAEVGLGYVKVGQQATTLSGGEAQRVKLAKE
LSRRATGNTLYILDEPTTGLHFEDVRKLLEVLHALVEQGNTVVVIEHNLDVIKTADWILD
LGPEGGVKGGEIVAEGVPEKVAAEPKSYTGRYLAPLLRGLSRDEPVPSEADASALASAQS
KGRRRG
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgctgacccacataaacgtccgcggcgcgcgtgagcataatctcaagggcgtcgacgtc
gatattccgcgcgatacgctgacggtgatcaccgggctgtcgggctcgggcaaaagctcg
ctcgccttcgacaccatctatgccgaggggcagcggcgttatgtcgagagcctgtcggcc
tatgcgcgccagtttctcgagatgatgcagaagcccgatgtcgatcatatcgaaggcctc
tcccccgcaatctcgatcgagcagaagacgacgagccgcaacccgcgttcgaccgtcgca
accgtcaccgaaatctatgattacatgcgcctgctctgggcgcgggtcggcgtgccctat
tcgcccgccaccggcctgccgatcagcgcgcagacggtgtcgcagatggtcgatcgcgtg
ctggcattgcccgagggcacccgcctgctcctcctcgcccccgtcgtgcgcggccgcaag
ggcgagtatcgcaaggaactcgccgagtggcagaaggcgggcttccagcgcgtccgcatc
gacggcgagacctatctgatcgaagaggcgccggcgctcgacaagaaatacaagcacgac
atcgaagtggtggtcgatcgcctggtggtgcgcgaggatatcgcgacgcggctggcggac
agtttcgaaacggcgctcaagctggcggacgggctggcctatgtcgatctggtcgatgcg
acggttgcggaaatctctcccctcccgcttgcgggaggggccgggggtgggcgcgtcaat
gaagcaccgcagtcctttgtcgcggacggggacattcccacccctaacccctcccgcaag
cgggaggggaatgcgaccggcggcaaccttaagggcgccggcatcccggacaaccgcatc
gtgttctcggagaaattcgcctgccccgtcagcggtttctccatccccgaaatcgaaccg
cgcctgttcagcttcaacgccccgcaaggcgcctgccccgcctgcgacggcctcggcgaa
cggctcgaattcgacgaggatctcgtcgtccccaacgatcagctcagcctcaagaagggc
gcgatcgtcccctgggccaaatccaacccgccctcgccctattacatgcaggtgctcggc
agcctcgcgcgcgaatatggcttcaagctcgacacgccctggcacgagctgtccgaggat
atccgccacgtcatcctgcacggcacgagtggcatccccgtcaccctcaccttcgtcgac
ggcaagaagagctacgacgtcaagaagccgttcgagggcgtgatcggcaacctcaaccgc
cgcatgctccagaccgaaagcgcctggaggcgcgaggaactgtccaaatatcaggcgagc
cacccctgcgagacctgcggcggcgcgcgcctcaagcccgaggcgctggccgtgaagatc
gccgggcaggacatcgcctatgccacccgcctgtcggtggtcgacgcgctcggctggttc
aaggagctgcccgaaagcctcaccggccagcagcgcgaaatcgccaccgccatcctcaag
gaaatcgacgagcggctcggcttcctcaacaatgtcgggctcgattatctcaacctcgat
cgcaccagcggcaccctgtcgggcggcgaaagccagcgcatccgcctcgccagccagatc
ggcagcggcctttcgggcgtgctctacgtgctcgacgaacccagcatcggcctgcaccag
cgcgacaacgacatgctgctcgccacgctgcgccgcctgcgcgatctcggcaacaccgtg
ctggtggtcgaacatgacgaggatgcgatccgcagcgccgactatatcctcgacatgggc
cccggcgcgggcgtgcatggcggcacggtcgtcgcgcgcggcacgctccccgaaatcctc
gccaccgaaggcagcgtcaccgccgattatctcaacggcacccgcgcgattcccgtcccc
gaaaagcggcgcaagggcaccggcaagaagctcaccgtccacaacgccaccgcgaacaac
ctcaccggcgtcaccgcgggcatcccgctcggcaccttcacctgcatcaccggcgtatcg
ggctcgggcaagtcgagcttcaccatcgacacgctctatgccgccgcggcgcgccagctg
aacggcgcccgcgtcctcgccggcaagcacgacaagatcaccgggctcgaacatctcgac
aaggtgatcgacatcgatcagtcgccgatcggccgcaccccgcgatcgaacccggcgacc
tataccggcgccttcaccaatatccgcgactggttcgccggcctccccgaagcgcaggcg
cgcggatacaagcccggccgcttcagcttcaatgtaaagggcggccgctgcgaggcatgc
cagggcgacggcgtgctcaagatcgaaatgcacttcctgcccgacgtctatgtcgaatgc
gatgtgtgccacggcgcgcgctacaatcgcgaaacgctcgaagtgaagttcaagggcaag
agcatcgccgacgtgctcgacatgacggtcgaggacgcggtggaattcttcaaggccgtc
cccccgattcgcgacaagatggcgatgctcgccgaagtcggcctcggctatgtcaaggtc
gggcaacaggcgacgaccctgtcgggcggcgaggcgcagcgcgtcaaactcgccaaggaa
ctcagccgccgtgcgaccggcaacacgctgtatatcctcgacgaacccaccacgggcctg
catttcgaggatgtgcgcaaattgctcgaagtgctccacgcgctggtcgaacaggggaat
acggtggtggtgatcgagcacaacctcgacgtcatcaagacggcggactggattctcgac
ctggggccagagggcggcgtgaagggcggcgaaatcgtcgctgagggcgtcccggaaaag
gtcgccgccgaaccgaagagctacaccgggcggtatctggcgccgctgttgcgaggcctg
agccgggacgagccggtcccgagcgaagccgacgcgtccgcgttggcttcggcgcaatcg
aagggccggaggcgggggtga
DBGET
integrated database retrieval system
