KEGG   Stakelama tenebrarum: G5C33_12370
Entry
G5C33_12370       CDS       T06464                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
spzr  Stakelama tenebrarum
Pathway
spzr03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spzr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    G5C33_12370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spzr03019]
    G5C33_12370
Messenger RNA biogenesis [BR:spzr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     G5C33_12370
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B RNase_J_C Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1 RsbRD_N
Other DBs
NCBI-ProteinID: QIG80496
UniProt: A0A6G6Y7E1
LinkDB
Position
complement(2506061..2507704)
AA seq 547 aa
MTPGKELLFVALGGSGEIGMNVNLYGTQGKWVMVDCGITFGDAGYPGIDVILPDLQFIEE
RLDDLLGIVLTHGHEDHIGALPYLALDLGVPLYATPFTAGLIQGKLDEEGISDRVELNII
ENEGSFKLGPFGFRYVPLAHSIPEGNAVLIDTPHGRIFHTGDWKLDEQPLLGTPSTAEEL
TEIGDDGVLALVCDSTNVFNEKASGSEAEVRTGLDEVIGGETGRVLVTTFASNAARLKTL
GEVARDTGRELCVAGRSLDRILRVAKATGYLRDFPETIDFDTAMSLPPGRVMIVATGGQG
EPRAALSRIAEGTHPIKLDKDDLVVFSSKQIPGNELAIGRIMNTLAHRGIRLITDRQAFV
HVSGHPGRPELAEMYRWIRPTYLLPVHGEVRHMIEQARFGVDQGISGAIFQVNGEVVRLA
PGTPEVIDHVPVGRLVLDGDVILPADGGTINERRKLALNGQISVAVALTSNGHMLGVPQI
RLQGVPVEEDRESFLQDAAAAAAEALRDRKRGVDIEDLRETLRLAVRRTATRWTGKKPVV
DVLIVEG
NT seq 1644 nt   +upstreamnt  +downstreamnt
gtgactcccggtaaggaacttctcttcgtcgcgctcggcggttcgggcgagatcggcatg
aacgtcaatctctacggcacccagggaaaatgggtgatggtcgattgcggcatcaccttt
ggcgacgcgggctatcctgggatcgacgtgatcctgcccgatctgcagtttatcgaggag
cggctcgacgatctgctcggtatcgtcctgacccacgggcatgaggatcatatcggcgcg
ctgccctatcttgcactcgatctcggcgttccgctctatgcgacgccgttcactgccggg
ctcattcagggcaagctcgatgaggaagggatttccgatcgcgtcgagctcaacatcatc
gagaatgaaggtagcttcaagctggggccgttcggcttccgctatgtcccgctcgcgcat
tcgatcccggaaggcaatgccgtcctgatcgatacgccgcacggccgcatcttccacacc
ggcgactggaagctggacgagcagccgctgctcggtacgccttcgaccgccgaggaactg
accgaaatcggcgatgacggcgtgctggcgctggtttgcgacagcaccaatgtcttcaac
gaaaaggcgtccggctccgaagccgaagtccgcaccgggcttgacgaagtcatcggcggt
gaaaccggccgggtgctggtcacgaccttcgcgtccaacgccgcgcggctgaagacgctg
ggcgaagtcgcgcgcgataccgggcgcgaactctgcgtcgccgggcgttcgctcgatcgc
atcctgcgcgtcgccaaggcgaccggctatctgcgtgacttccccgagacgatcgatttc
gacacggcgatgagcctgccgcccgggcgcgtgatgatcgtcgcgaccggcgggcaaggc
gaaccgcgcgcggcgctgtcgcgcatcgccgaggggacgcatccgatcaagctcgacaag
gacgatctcgttgttttttcgtcgaagcagattcccggtaacgagctcgccatcggccgg
atcatgaacacgctggcgcatcgcggcatccggctgatcaccgatcgccaggcgttcgtg
catgtttcggggcatccgggacggccggaactggcggagatgtatcgctggatccgcccg
acctatctgctgccggtgcatggcgaagtgcgccacatgatcgagcaggcgcggttcggc
gtcgatcaggggatttcgggcgcgatttttcaggtgaacggcgaagtcgtgcggcttgcg
cccggcacgcccgaagtgatcgatcatgtgcccgtcggccggctggtgctcgacggcgac
gtgatcctgcccgccgatggcggcacgatcaacgagcggcgcaagctggcgctcaacggc
cagatttcggtcgcggtggcactgacatcgaacgggcacatgctcggcgtgccgcagatc
cgccttcagggggttccggtggaggaagaccgcgaatccttccttcaggacgctgcagcc
gctgcggcggaggcattgcgcgatcgtaagcgcggggtcgatatcgaggatctgcgcgaa
accctgcgtcttgcagtgcggcgcacggcaacgcgctggaccggcaagaagccggtcgtc
gatgttctgatcgtggagggataa

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