Stakelama tenebrarum: G5C33_15590
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Entry
G5C33_15590 CDS
T06464
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
spzr
Stakelama tenebrarum
Pathway
spzr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spzr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5C33_15590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spzr03019
]
G5C33_15590
03009 Ribosome biogenesis [BR:
spzr03009
]
G5C33_15590
Enzymes [BR:
spzr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G5C33_15590
Messenger RNA biogenesis [BR:
spzr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G5C33_15590
Ribosome biogenesis [BR:
spzr03009
]
Prokaryotic type
rRNA helicases
G5C33_15590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIG81064
UniProt:
A0A6G6Y7Z6
LinkDB
All DBs
Position
complement(3177916..3179676)
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AA seq
586 aa
AA seq
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MSFSNLPAIFGEALAERGYAEPTAVQAAVIAPEASGRDLIVSAQTGSGKTVAFGLAMAEN
LLDRLDGPAEAPLALIVAPTRELALQVSRELIWLYARTGARIATCVGGMDPSRERRVLRG
GPHIVVGTPGRLRDHLERGALDLGNCAAVVLDEADEMLDMGFREDLEEILDATPEGRRTL
LFSATMPKPIVALAKRYQRDALRIATGGEERGHGDIAFQVVTVSPSEIEAAAVNLLRYHE
AETAILFCATRDNVRRLHATLQERGFGVVALSGEHSQSERNQALQALRDRRARVCVATDV
AARGIDLPSLSLVIHVEIPRDAETLQHRSGRTGRAGKKGTAVLIVPYPRRRRVESMLRGA
RINAEWIDAPSPEAIRAQDRERLLSALLAPAEYDEEDRELAQRLLAERSPEDIAAALVRS
HRAAMPQPEEMIENTPEARRAAQQERHRPGFEDTVWFRLDLGRRQNADPRWLLPLLCRRG
HITRNEVGAIRIGANETHFQVPRAIAKKFAAALERTATDEEDAVRIEPSDGPAEGGRGRP
GRPPHKARPAGARKHPGGPKPHRGAKGEKPRTGGKDKKPKRKDRPA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtccttttcgaatctccccgccattttcggcgaagcgctggccgaacgtggctatgcc
gaacctactgcggtgcaggccgccgtcatcgcccccgaagcatcgggccgtgacctgatc
gtctcggcgcagaccggatcgggcaagaccgtcgccttcggtctcgccatggccgaaaac
ctgctcgaccggctcgatggcccggccgaggcgccgctggccttgatcgtcgcgccgacg
cgcgaactggcattgcaggtcagccgcgagctgatctggctctatgccaggaccggtgcg
cgcatcgccacctgcgtcggcgggatggacccctcgcgcgagcggcgcgtgctgcgcggc
gggccgcatatcgtcgtcggtacgccggggcgactgcgcgaccatctcgagcgcggcgcg
cttgatcttggcaattgcgcggcggtggtgctcgacgaggccgacgagatgctcgacatg
ggctttcgcgaggaccttgaggaaattctcgacgccacgcccgaagggcggcggacattg
cttttctccgccacgatgcccaagccgatcgtcgcgctcgccaaacgctatcagcgcgac
gcgctgcgcatcgcgaccggcggcgaggaacgcggtcacggcgacatcgcgttccaggta
gtgacggtatcgccctcggaaatcgaagcggctgcggtaaacctgctgcgctatcacgag
gcggaaaccgcgatcctgttctgcgcgactcgcgacaatgtacggcggctgcacgcgacg
ctgcaggagcgaggtttcggggtcgtcgccctgtcgggcgagcattcgcaatccgaacgc
aatcaggcgctgcaggcattgcgcgaccgccgcgcgcgcgtctgcgtcgccaccgatgtt
gctgcgcgcgggatcgacttgccgagcctcagcctcgtcatccatgtcgaaataccgcgt
gacgccgaaacgctccagcatcgctcgggccgcaccgggcgcgcggggaagaagggaacg
gcggtgctgatcgttccctatccgcgccgccgccgcgtcgaatcgatgctgcgcggcgcg
cgcatcaacgccgaatggatcgacgcgccgagccccgaggcgatccgcgcgcaggatcgc
gagcggctgctctcggcattgctcgcgcccgccgaatatgacgaggaagatcgcgaactc
gcgcagcgtctgctcgccgaacgttcgcccgaggatattgcggccgcgcttgtccgctcg
catcgcgcggcaatgccgcagcccgaggagatgatcgaaaacacgccagaggcgcgccgc
gccgcgcagcaggaacggcatcgtccggggttcgaggacactgtctggttccggctcgat
ctggggcggcggcaaaatgccgatccgcgctggctgctgcccttgctctgccgtcgcggg
cacatcacccgcaacgaagtcggcgcgatccgcatcggcgccaatgaaacgcatttccag
gtgccgcgcgcgatcgcgaagaagttcgccgccgcgctggaacgtaccgcgacggacgaa
gaggacgcggtgcggatcgaaccctcggacggtccggccgaaggcggtcgcggtcgtccc
ggccggccgccgcacaaggcgcgccccgccggcgcgcggaagcatccgggcggacccaag
ccgcatcgcggcgccaagggcgaaaagccgcgcaccggcggcaaggacaagaagcccaag
cgcaaggatcgtccggcgtga
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