Stakelama tenebrarum: G5C33_18490
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Entry
G5C33_18490 CDS
T06464
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
spzr
Stakelama tenebrarum
Pathway
spzr00300
Lysine biosynthesis
spzr00470
D-Amino acid metabolism
spzr01100
Metabolic pathways
spzr01110
Biosynthesis of secondary metabolites
spzr01120
Microbial metabolism in diverse environments
spzr01230
Biosynthesis of amino acids
Module
spzr_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
spzr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
G5C33_18490 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
G5C33_18490 (dapF)
Enzymes [BR:
spzr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
G5C33_18490 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QIG81578
UniProt:
A0A6G6YA43
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All DBs
Position
complement(3729066..3730016)
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AA seq
316 aa
AA seq
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MQIAFIKCQGSGNDFPLMDARAATLAEAEWKKLARALADRAGPVGGDGLLLLTAGDADHA
FGMRMFNSDGSEAETCLNGLRCTARLGFELLGLDHARVRLKTSSADVAREPDLAPGVVTI
RTQVGPASLAATDIGLRIDAAQIVDAPIPGLPSERHFTGVAMPNPHLVAFVDHVDEAELV
ALGDWCEAAPPLIPARANVSFVEARDGGLFVRTYERGVGLTDSCGSAMAASTFAAGLAGR
IAFGETVTVFNRGGMVRASATAPEAGAVVTIRGNASFLYDATIGFDRETGMIEAPLVHAR
RFDEAEAWEAVLANLK
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgctttcatcaagtgtcagggctccggcaacgattttccgctgatggacgca
cgcgccgccacgctggccgaggccgaatggaagaaactcgcgcgcgcgctggccgatcgt
gccgggccggtggggggcgatggcttgctgctgctcaccgcgggcgatgcggatcacgcc
ttcggcatgcggatgttcaattcggacggcagcgaggcggagacgtgcctcaacgggctg
cgctgcaccgcgcggctgggattcgagctgctcgggctcgatcatgcccgggtgcggctc
aagaccagctcggcggatgtcgcgcgcgagcccgatcttgcgcctggcgtagtcacgatc
cgcacccaggtggggccggcatcgctggcagccaccgatatcgggctgcggatcgacgcg
gcgcagatcgtcgacgcgccgatacccggtctgcccagcgaacggcatttcacgggcgtt
gcgatgcccaatccgcatctcgtcgcctttgtcgatcatgtcgatgaggccgaactggtg
gcgctgggcgactggtgcgaagcagcgccgccgctgatcccggcgcgcgccaatgtcagc
ttcgtcgaagcgcgcgacggcggattgttcgtgcgcacctatgaacgcggtgtcgggctg
accgacagttgcggcagcgcaatggcggcttccaccttcgcggcggggctggccggccgg
atcgcctttggcgaaacggtgaccgtgttcaatcgtggcggaatggtgcgtgcctcggcg
actgcgcccgaggccggcgcagtggtgacgatccgcggcaatgccagcttcctgtacgat
gcgacgatcggattcgatcgcgagacgggcatgatcgaggcgccgctggtgcatgcgcgc
cggtttgacgaggccgaggcttgggaagccgtgcttgccaacctgaaataa
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