KEGG   Sphingomonas qomolangmaensis: NMP03_00115
Entry
NMP03_00115       CDS       T08594                                 
Symbol
parE
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
sqo  Sphingomonas qomolangmaensis
Brite
KEGG Orthology (KO) [BR:sqo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sqo03032]
    NMP03_00115 (parE)
   03036 Chromosome and associated proteins [BR:sqo03036]
    NMP03_00115 (parE)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sqo02048]
    NMP03_00115 (parE)
Enzymes [BR:sqo01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     NMP03_00115 (parE)
DNA replication proteins [BR:sqo03032]
 Prokaryotic type
  DNA Topoisomerases
   NMP03_00115 (parE)
Chromosome and associated proteins [BR:sqo03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    NMP03_00115 (parE)
Prokaryotic defense system [BR:sqo02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    NMP03_00115 (parE)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c HATPase_c_3
Other DBs
NCBI-ProteinID: UUL82696
LinkDB
Position
complement(23697..25673)
AA seq 658 aa
MSNDLFAAPVTAGTDYNAASIEVLEGLEPVRRRPGMYIGGTDERALHHLAAEVLDNAMDE
AVAGHATRIEVTLDEGNRLTIVDNGRGIPVDPHPRFPDKSALEVILSTLHSGGKFNGKAY
ATSGGLHGVGISVVNALSVDTVVEVARGRELYRQRFSQGQTLGGIEHLGGTPNRRGTSVA
FTPDPEIFGAMQFKPARLHKLARSKAYLFAGVEIRWKCAPALISDDTPTEAVFQFPGGLA
DHLKEQVGGRECATAEFFAGRQAFPDEQGSVEWAVAWPLWSDASYSWYCNTIPTPDGGTH
EAGLRAALTKGLRAFGDLVGQKKAKDITADDLMVGTELMLSVFIREPQFQSQTKDRLTSP
EAAGLVERAVRDHFDQYLSDRMERGKALLGYVLDRMDERLKRKAEREVKRKTATSARKLR
LPGKLTDCSADDPKGTELFIVEGDSAGGSAKQARDRKTQAILPIRGKILNVASATSAKIM
ANLEIADLTLAMGCGTRKDCIPDNLRYERIIIMTDADVDGAHIATLLMTFFFQEMPELVK
RGHLYLAQPPLYRLTVGAKSLYARDDAHRAEIERTVFKGKKVEVSRFKGLGEMNPMQLRE
TTMDPKTRGLLRITLPQEYEERAEVKDLVDRLMGTNPAHRFAFIQQNAARLEEDAIDA
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgtccaacgacctgttcgccgcgcccgtcaccgccggcaccgattacaacgccgcatcg
atcgaagtgctcgaggggctcgaacccgttcgccgccgcccgggcatgtatatcggcggc
accgacgagcgcgcgctgcaccacctcgccgccgaagtcctcgacaacgcgatggacgaa
gcggtcgcggggcatgcgacgcggatcgaggtgacgctcgacgaaggcaaccggctgacg
atcgtcgacaatggtcgcggcatcccggtcgacccgcatccgcgctttcccgacaaatcg
gcgctcgaggtgatcctgtcgacgctccattcggggggcaagttcaatggcaaggcttat
gcgacctcgggcgggctgcacggcgtcggcatcagcgtggtcaacgcgctgtcggtcgat
accgtggtcgaagtcgcacgcgggcgcgaattataccgccagcgcttcagccaggggcag
acgctgggcgggatcgagcatctgggcggcacccccaaccggcgcggcacctcggtcgcc
ttcacccccgatcccgaaatcttcggcgcgatgcagttcaagcccgcgcggctgcacaag
ctggcgcgatccaaggcctatctgttcgccggcgtcgaaatccgctggaaatgcgcgccc
gcgttgatctccgacgacaccccaacagaagcggtgttccaattccccggcgggctcgcc
gatcacctcaaggaacaagtcggcggccgcgaatgcgcgacggcggagtttttcgccgga
cgccaggccttccccgacgaacagggcagcgtcgaatgggcggtcgcctggccgctctgg
tccgacgcatcgtacagctggtattgcaacaccatccccacccccgatggcggcacgcac
gaggcggggcttcgcgccgcgttgaccaaggggctgcgtgcgttcggcgatctggtgggc
cagaaaaaggccaaggacatcaccgccgacgatctgatggtcggcaccgaactgatgctc
tcggttttcatccgcgagccgcaattccagagccagaccaaggaccggctcaccagcccc
gaggcggcgggcctggtcgagcgcgcggtgcgcgatcatttcgaccaatatctgtccgac
cggatggagcgcggcaaggcgctgctcggctatgtcctcgaccggatggacgagcgattg
aagcgcaaggccgagcgcgaggtgaagcgcaagaccgcgacctcggcgcgcaagctccgg
ctgcccggcaagctcaccgattgttcggccgacgaccccaagggcaccgaattgttcatc
gtcgaaggcgacagcgccggcggcagcgccaagcaggcgcgcgaccgcaagacccaggcg
atcctgccgatccgcggcaagattttgaacgtcgccagcgccaccagcgccaagatcatg
gcgaacctagagatcgccgacctgacgctggcaatgggatgcggcacccgcaaggactgc
atccccgacaatctgcgctacgaacgcatcatcatcatgaccgacgccgatgtcgacggc
gcgcacatcgccacgctgctgatgaccttctttttccaggaaatgcccgagctggtgaag
cgcgggcacctgtatctcgcgcagccgccgctctaccgcctgacggtgggcgccaaatcg
ctctacgcccgcgacgacgcgcaccgcgccgagatcgagcgcacggtgttcaagggcaag
aaggtcgaagtctcgcgcttcaagggcctcggcgagatgaacccgatgcaattgcgcgaa
acgacgatggaccccaagacgcggggattgctgcgcatcacactgccgcaggaatatgag
gagcgcgccgaggtgaaggatctggtcgatcggctgatgggcaccaaccccgcccaccgc
ttcgccttcatccagcaaaatgcggctcggctggaggaggatgcaatcgatgcttga

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