Sphingomonas qomolangmaensis: NMP03_00590
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Entry
NMP03_00590 CDS
T08594
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sqo
Sphingomonas qomolangmaensis
Pathway
sqo00061
Fatty acid biosynthesis
sqo00071
Fatty acid degradation
sqo01100
Metabolic pathways
sqo01212
Fatty acid metabolism
sqo02024
Quorum sensing
sqo04146
Peroxisome
Module
sqo_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NMP03_00590
00071 Fatty acid degradation
NMP03_00590
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NMP03_00590
09145 Cellular community - prokaryotes
02024 Quorum sensing
NMP03_00590
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sqo01004
]
NMP03_00590
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sqo04147
]
NMP03_00590
Enzymes [BR:
sqo01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NMP03_00590
Lipid biosynthesis proteins [BR:
sqo01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NMP03_00590
Exosome [BR:
sqo04147
]
Exosomal proteins
Exosomal proteins of breast milk
NMP03_00590
Exosomal proteins of breast cancer cells
NMP03_00590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UUL82780
LinkDB
All DBs
Position
complement(104473..106164)
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AA seq
563 aa
AA seq
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MNDPETAWRTAYHHPGAWDRAFPPQTMIALFEQSARERGDAPLIEFLGRRYSYAETLDGA
SRVACGLAALGYGKGDRIGLYLPNVPHYVAAYYGILKLGATVVNFSPLYTADELAHQVED
SGTRLLFTISASALLPTAVKVLDQSSLERLVVGSVAGALPAAKSVFYRMLKRKEIAPRPD
DSRITAFSALIANPGACETPPLDPMTDLALIQYTGGTTGSPKGAMLSHQNLSANARQVAE
VDPQRGIGVDRILGALPMFHVFANTCVLNRTVVAGGEMVLLPRFEAGAALAAIARTGATA
LPGVPTMYRALLEHPSLTKTDLSSLRICISGGAPLPAELKARFEEVSGAKLVEGYGLSES
SGVVSTNPYEGLNKSGTIGLPLPATRVRLVDKADPSRPAPDGEPGEIVVAGPQIMLGYWN
RPDADGEAFCHAADGSRWLRTGDVGTIDEDGYIRIVDRLKDMIAVGGFKVFPSQIEAILY
HHPAVREALVIGMPDTYRGEVPRAYVTLVEDSGVTGAAIAAWINPQLGKHERLDAVVVRE
ALPKTMIGKLSRKDLVAELAAEA
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcccgagaccgcctggcggaccgcctatcaccaccccggcgcgtgggatcgc
gcgttcccgccgcagacgatgatcgcgctgttcgaacaatcggcgcgcgagcgcggcgac
gcgccgttgatcgaatttctgggccggcgctacagctatgccgagacgctcgacggcgcg
agccgcgtcgcgtgcgggctggcggcgctgggctatggcaagggcgaccggatcggcttg
tacctgcccaacgtcccgcattacgtcgcggcctattacggcatcctcaagctcggcgcg
acggtggtgaatttttcgccgctctataccgccgacgagctcgcgcatcaggtcgaggat
tcggggacgcggctgctgttcacgatctcggcgagcgcattgttgccgaccgcggtgaag
gtgctcgaccagagttcgctcgagcggctggtggtggggtcggtcgctggcgcgttgccc
gccgcgaagtcggtcttctaccgcatgctcaagcgcaaggagatcgcgccgcgccccgac
gattcgcggatcaccgctttctcggcgctgatcgccaacccgggcgcgtgcgagacgccg
ccgctcgacccgatgaccgatctggcgctgatccaatataccggcggcaccaccggcagc
cccaagggcgcgatgctgagccaccagaatctgtcggccaatgcgcggcaggtggccgag
gtcgatccgcagcgcgggatcggggtcgatcgcatcctgggcgcgctgccgatgttccat
gtgttcgccaacacctgtgtgctcaaccgcaccgtggtggcggggggcgagatggtgctg
ctgccccgcttcgaggcaggggcggcgctggcggcgatcgcgcgcaccggcgcgaccgcg
ctgcccggcgtgccgacgatgtatcgcgcgctgctcgagcatccgagccttaccaagacc
gacctcagctcgctgcggatctgcatttcgggcggcgcgccgctgcccgccgagctcaag
gcgcggttcgaggaagtgtcgggggcgaagctggtcgagggctatggcctgtcggaaagc
tcgggcgtggtgtcgaccaatccctatgaggggctgaacaagtcggggacgatcggcctg
ccgttgcccgcgacgcgggtgcggctggtcgacaaggccgatccctcgcgccccgccccc
gatggcgagccgggcgagatcgtcgttgcggggccgcagatcatgctcggctattggaac
aggcccgatgccgatggcgaggcgttctgccacgccgccgatggcagtcgctggctgcgc
accggcgatgtggggacgatcgacgaagacggctatatccgcatcgtcgaccggctgaag
gacatgatcgcggtcggcggtttcaaggtgttccccagccagatcgaagcgatcctgtac
caccaccccgcggtgcgcgaggcgctggtgatcggcatgcccgacacctaccgcggcgaa
gtgccgcgcgcctatgtcacattggtcgaggacagtggcgttaccggcgcggcgatcgcg
gcgtggatcaacccgcagctcggcaagcacgagcggctcgacgcggtggtggtgcgcgag
gcgctccccaagacgatgatcggcaagctcagccgcaaggatctggtcgctgagctcgcg
gcggaggcttga
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