Sphingomonas qomolangmaensis: NMP03_01435
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Entry
NMP03_01435 CDS
T08594
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sqo
Sphingomonas qomolangmaensis
Pathway
sqo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NMP03_01435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sqo03021
]
NMP03_01435
03400 DNA repair and recombination proteins [BR:
sqo03400
]
NMP03_01435
Enzymes [BR:
sqo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NMP03_01435
Transcription machinery [BR:
sqo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NMP03_01435
DNA repair and recombination proteins [BR:
sqo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NMP03_01435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
UUL82931
LinkDB
All DBs
Position
272650..273714
Genome browser
AA seq
354 aa
AA seq
DB search
MSVNAKNWQELKKPSGLEKKAGGDTKRKATFIAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNVKQLAIRMQGEGPKRLQLSATGPATVTAGDI
AVSGDIEVMNPKLVLCHLDEGATLNMELTADVGKGYVPAAANRPADAPIGLIPIDALYSP
VRQVSYKVENTRVGQELDYDKLTLTIETDGTVTPDDAVAYAGRILQDQLSLFVHFDDSAM
TRSAPVSAGLPVAAAETPGDTATINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKT
EAEMLRTPNFGRKSLNEIKEVLSGMGLRLGMEIPGWPPENIEEMAKKLEQEIMG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgtcaatgcaaagaactggcaggagctgaagaagcccagcggtctcgaaaagaag
gccggtggcgataccaagcgcaaggcgaccttcatcgccgaaccgctcgagcggggcttc
ggtctgacgctcggcaacgcgctgcgccgcgtgttgctgtcgtcgctgcagggtgctgcg
gtcacctcgatcaagatcgagaacgtgctgcacgaattctcgtcgctggcgggagtccgc
gaggacgtcaccgacatcgtcctgaacgtgaagcagctggcgatccgcatgcagggcgaa
ggccccaagcggctccagctgtcggcgaccggtcctgcgaccgtcactgccggtgacatc
gccgtttcgggtgacatcgaagtgatgaaccccaagctggtactgtgccaccttgatgaa
ggcgcgacgctcaacatggagctgacggctgacgtcgggaagggctatgtgcccgccgct
gctaaccgtccggccgacgcaccgatcgggctgattcccatcgacgcgctgtattcgccg
gtgcgccaggtcagctacaaggtcgagaacacccgcgtcgggcaagagctcgattacgac
aagctgacgctgacgatcgagaccgatggcaccgtgacccctgacgatgcggtggcctat
gccggtcgcattctgcaggaccagttgtcgctgttcgtccacttcgacgattcggcgatg
actcgcagcgcgccggtttcggcgggcctgcccgttgccgctgctgaaacgcctggcgat
accgcgacgatcaaccgttaccttctcaagaaggtcgacgagttggagctgtcggtgcgt
tcggccaactgcctcaagaacgacaacatcatctatatcggcgatctggtccagaagacc
gaagccgagatgctgcgcacgccgaatttcggccgcaagtcgctcaacgagatcaaggaa
gtgctttcgggcatggggctccgcctggggatggaaattcctggctggccgcctgagaac
atcgaagagatggccaagaagctcgagcaggaaatcatggggtga
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