Sphingomonas qomolangmaensis: NMP03_02020
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Entry
NMP03_02020 CDS
T08594
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
sqo
Sphingomonas qomolangmaensis
Pathway
sqo00300
Lysine biosynthesis
sqo01100
Metabolic pathways
sqo01120
Microbial metabolism in diverse environments
sqo01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NMP03_02020 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sqo01002
]
NMP03_02020 (dapE)
Enzymes [BR:
sqo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
NMP03_02020 (dapE)
Peptidases and inhibitors [BR:
sqo01002
]
Metallo peptidases
Family M20
NMP03_02020 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Motif
Other DBs
NCBI-ProteinID:
UUL83034
UniProt:
A0ABY5L7S9
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All DBs
Position
complement(399369..400490)
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AA seq
373 aa
AA seq
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MTHDPIALTTALLAVDSVTPARGQVFDILEAMLVPLGFAVDRFVAGEAPDGPVENLLATR
GEGGTHLAFAGHLDVVPPGTGWSSAPFAPEIRGDHLYGRGAVDMKGAIGAFVAACADPQP
GGTLSLIITGDEEGPATFGTPALIDRMAALGIAPDLCIVGEPTSVDCLGDMMKIGRRGSV
NLWITVPGRQGHVAYPHLADNPIPRLVAILAEIDSIALDHGTDWFQPSNIEVTDITVGNP
ATNVIPAQASARISIRFNDLHRGAELGALIEGLARRHAPEASVVARVSGEAFLTQPGRLS
MIVADSVEAHTGIRPALSTSGGTSDARFLAKLCPVVEFGLCNATMHKLDEAVAVADLVTL
RAIYADIIRRTLG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgacccacgatccgatcgccctcaccaccgcgctcctcgccgtcgacagcgtcaccccg
gcgcgcggccaggtgttcgacatcctcgaagcgatgctcgtcccactcggcttcgcggtc
gatcgattcgtcgcgggcgaggcccccgacgggccggtcgaaaacctcctcgccacccgc
ggcgagggcggcacccacctcgcctttgccgggcatctcgacgtcgtcccccccggcacc
ggctggtccagcgcgccgttcgcgcccgaaatccgcggcgatcacctctatggccgcggc
gccgtcgacatgaagggcgcgatcggcgcgttcgtcgccgcctgcgccgatccacagccg
ggcggcacgctgagcctgatcatcaccggcgacgaagagggccccgcgaccttcggcacc
ccggcgctgatcgaccgcatggcggcgctgggaatcgcgcccgacctctgcatcgtcggc
gagccgaccagcgtcgattgcctgggcgacatgatgaagatcggccgccgcggatcggtg
aacctctggatcaccgtccccggccgccaagggcacgtcgcctacccgcacctcgccgac
aatccgatcccgcggctggtcgcgatcctggccgagatcgattcgatcgcgctcgatcac
ggcaccgactggttccagccctcgaacatcgaagtgaccgacatcaccgtcggcaatccc
gcgaccaacgtcatcccggcgcaagcctcggcgcggatcagcatccgcttcaacgatctg
catcgcggcgccgagctcggggcgctgatcgaggggctggcccggcgccacgcgcccgag
gcgagcgtcgtcgcgcgggtttcgggcgaggccttcctcacccagccgggcaggctctcg
atgatcgtcgccgattcggtagaagcgcacaccggcatccgccccgcgctatcgaccagc
ggcggcacctcggacgcgcggttcctggccaagctctgcccggtggtcgaattcgggctc
tgcaacgcgacgatgcacaagctcgacgaggcggtcgcggtcgccgacctcgtcacgctg
cgcgcgatctacgccgacatcatccggcgaacgctcggctga
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