Sphingomonas qomolangmaensis: NMP03_05470
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Entry
NMP03_05470 CDS
T08594
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sqo
Sphingomonas qomolangmaensis
Pathway
sqo03030
DNA replication
sqo03430
Mismatch repair
sqo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMP03_05470
03430 Mismatch repair
NMP03_05470
03440 Homologous recombination
NMP03_05470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sqo03032
]
NMP03_05470
03400 DNA repair and recombination proteins [BR:
sqo03400
]
NMP03_05470
Enzymes [BR:
sqo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NMP03_05470
DNA replication proteins [BR:
sqo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NMP03_05470
DNA repair and recombination proteins [BR:
sqo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NMP03_05470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_5
AAA_30
AAA_16
AAA_19
AAA_14
AAA_24
AAA_18
PIF1
AAA_assoc_2
Glyco_tranf_2_5
DUF815
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
UUL83664
LinkDB
All DBs
Position
complement(1142196..1143860)
Genome browser
AA seq
554 aa
AA seq
DB search
MSDLSFDLGEPAPPPKPEAYRVLARKYRPQTFAELIGQDAMVTTLGNAIKRDRLAHAFLL
TGVRGVGKTSTARLIAKALNCIGADGQGGPTIDPCGVCDPCIAIAEGRHIDVIEMDAASH
TGVDDVREIIEASRYSAVSARYKIYIVDEVHMLSKSAFNALLKTLEEPPAHVKFLFATTE
VNKVPITVLSRCQRFDLRRIGSDKLAAHFAHVVTAEGFEAEPEALALIARAAEGSARDGL
SILDQAIAHAGLEGGGVRAVVVRDMLGLSDRGAVRAMFALLLGGDSAGALAALRKQYDLG
VDPLSVLRTLLETVHGVTLAKVGTEPDPSQPVEEREALADWASRLSFPILHRLWQLLLKG
HDEVARAAMPIEACEMALLRVIHASQLPDPGDLARQLADGKTPAIQAPPQQPQPAAAEPV
AAAPLPASTAPALPDTVEAIRDLLARHGRHALGEAVRNHARPTRIEPPEIELGTQRPIPS
DFARDLADELKRITGARWRVTTSDAAGQPSMREAEEAAEAAKEAEVRNSPVVAAALAAFP
GARLLGVTPDRSVG
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatctttccttcgatctcggcgagccagcgccgccgcccaagcccgaggcgtat
cgggtgctggcgcgcaaataccgtccgcagacctttgccgaactgatcggccaggacgcg
atggtcaccacgctgggcaatgcgatcaagcgcgaccggctggcgcatgccttcctgctc
accggggtgcgcggggtcggcaagacgtcgaccgcgcggctgattgccaaggcgctcaac
tgcatcggggcggacgggcagggcgggccgacgatcgatccgtgcggggtgtgcgatccg
tgcatcgcgatcgccgaggggcggcatatcgacgtgatcgagatggacgccgcgagccat
accggcgtcgacgacgtccgcgagatcatcgaggcgtcgcgctattcggcggtgtcggcg
cgctacaagatctacatcgtcgacgaagttcatatgctctcgaaaagcgccttcaacgcg
ctgttgaagacgcttgaagagccacccgcgcatgtgaagttcctgttcgcgaccaccgag
gtgaacaaggtgccgatcaccgtgctgtcgcgttgccagcgcttcgatctgcggcggatc
ggttcggacaagctggcggcgcatttcgcgcatgtcgttaccgccgaggggttcgaggcc
gagcccgaggcgctggcgctgatcgcgcgcgctgccgaaggatcggcgcgcgacgggctt
tcgattctcgaccaggcgatcgcgcatgccgggctcgagggcggcggggtgcgcgccgtg
gtcgttcgcgacatgctggggctgtcggatcgcggtgcggtgcgcgcgatgttcgcgctg
ttgcttggcggcgattcggcaggggcgctggcggcgctgcggaagcaatatgatctgggg
gtcgatccgctgtcggtgctgcggacgctgctcgagacggtgcatggcgtgacgctcgcc
aaggtggggaccgagcccgatccttcgcagccggtcgaagagcgcgaggcgctcgccgac
tgggcgtcgcggctgtcgtttccgatcctccaccggctgtggcagctgctgctcaagggg
catgacgaggtcgcgcgcgcggcgatgccgatcgaggcgtgtgaaatggcgctgctgcgc
gtgatccatgcgtcgcaactgcccgaccccggcgacctggcgcggcagcttgccgacggc
aagacgccggcgatccaggccccgccccagcagccgcaacccgctgcggcggagcccgtt
gcggcggcaccgttgccagcttcgaccgcgccggcgttgcccgacacggtcgaggcgatc
cgcgacctgctcgcccgccatggccgtcacgcgctgggcgaagcggtgcgcaaccatgcg
cgcccgactcggatcgaaccgcccgagatcgagctcgggacgcagcgaccgatcccttcg
gacttcgcgcgtgaccttgccgacgaactcaagcggatcactggcgcgcgttggcgcgtt
accaccagcgacgccgccggccagccttcgatgcgcgaagccgaagaggctgccgaggcc
gcgaaggaagcagaagtacgcaattcccccgtcgtcgcagctgcacttgccgcctttccc
ggagcaaggctgctcggcgtaacccccgatcggagtgtaggatga
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