Sphingomonas qomolangmaensis: NMP03_05795
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Entry
NMP03_05795 CDS
T08594
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sqo
Sphingomonas qomolangmaensis
Pathway
sqo03420
Nucleotide excision repair
sqo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NMP03_05795
03430 Mismatch repair
NMP03_05795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sqo03400
]
NMP03_05795
Enzymes [BR:
sqo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NMP03_05795
DNA repair and recombination proteins [BR:
sqo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NMP03_05795
MMR (mismatch excision repair)
Other MMR factors
NMP03_05795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
EcoEI_R_C
Motif
Other DBs
NCBI-ProteinID:
UUL83713
LinkDB
All DBs
Position
1213567..1215858
Genome browser
AA seq
763 aa
AA seq
DB search
MSLPQPSPDDPPYLRGLNTPQRQAVLTTDGPVLVLAGAGTGKTAALTARLAHLLYTRKAW
PSEILAVTFTNKAAREMRERVGRLVGDAVEGMPWLGTFHSIGAKMVRRHAELIGLQSNFT
ILDTDDQLRLMKQLIAAADLDEKRWPARQLGGLIDGWKNKGMTPKDLDAGEAELFANGRG
QELYAAYQARLLALNACDFGDLLLHALVLLRTHREVLEQYQQRFRYMLVDEYQDTNSVQY
LWLRLLAQARKNLCCVGDDDQSIYSWRGAQVENILKFERDFPGAAVIKLEQNYRSTGHIL
AAASGVIAHNGGRLGKTLWTEANEGEKVRVVGVWDGPEEARRVGEQIEGEMRPRNGEGGL
SLNDVAILVRAQHQTREFEDRFIAIGMPYRIVGGFRFYERAEIRDALAYLRVVSQPGDDL
AFERIVNVPKRGLGDKAVQKVHQLARAEGIPLTTAAARILDTDELTPQARRSLGNLVGDM
ARWRAMAGELPHAELARQLLDESGYTAMLQAEKSVEAAGRLENLTELVRAMEEYESLGAF
LEHVSLVMDNENRQQDAQVTIMTIHAAKGLEYDTVFLVGWEEGIFPSQRALDEGGLASLE
EERRLAYVAITRARRKATILHAANRRIYGQWTSSLPSRFVEELPPEHIEAETTMSGGESL
WRANWSENADPFSDVARGSGRGPGWQRAASTGTFVREPTRIIEARASAVSLGNKGRSDVS
VGLRVFHQKFGYGSIAEIEGNKLEIDFETAGRKRVMDSFVTVG
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcccccaaccaagccccgacgatccgccctatctgcgcggcctgaacacgccg
cagcgccaggcggtgctcaccaccgacggcccagtactggtgctcgcgggcgcgggcacc
ggcaagaccgcggcgctcaccgcgcggctggcgcacctgctctacacccgcaaggcatgg
ccgtcggagatcctggcggtcaccttcaccaacaaggccgcgcgcgagatgcgcgagcgc
gtcgggcggctggtcggcgacgcggtcgaggggatgccgtggctcggcaccttccattcg
atcggtgccaagatggtgcgccgccatgccgagctgatcgggctgcagagcaacttcacc
atcctcgataccgacgaccagttgcggctgatgaagcagctgatcgccgccgccgatctc
gacgagaaacgctggcccgcgcgccaattgggcgggctgatcgacgggtggaagaacaag
gggatgacccccaaggacctcgacgcgggcgaggccgaattattcgccaacgggcgcggc
caggagctgtacgccgcctatcaggcacggctgctcgcactcaacgcctgcgatttcggc
gatctgctgctccacgcgctggtgctgctcaggacgcatcgcgaagtgctcgaacaatat
cagcaacgcttccgctacatgctggtggacgaatatcaggacaccaacagcgtccaatat
ctgtggctgcggctgctggcgcaggcgcgcaagaacctgtgctgcgtcggcgacgacgac
cagtcgatctattcttggcgcggtgcgcaggtcgagaacatcctgaagttcgagcgcgac
tttcccggcgcggctgtgatcaagctcgagcagaattaccgttcgaccgggcatatcctg
gccgcggcatcgggggtgatcgcgcataatggcgggcggctgggcaagacgctgtggacc
gaggcgaacgagggcgaaaaggtccgcgtcgtcggcgtctgggacggccccgaggaagcg
cggcgtgtcggcgagcagatcgagggcgagatgcgcccaagaaacggagagggcgggctc
agcctcaacgacgtcgcgatcctggttcgcgcgcagcaccagacccgcgagttcgaggat
cgcttcatcgcgatcggcatgccgtatcgaatcgtcggcggcttccgcttctatgaacgc
gccgaaatccgcgatgcgctggcatatctgcgcgtcgtctcgcagcccggcgacgatctg
gcgttcgaacggatcgtcaacgtccccaagcgcggcctgggcgacaaggcggtgcagaag
gtccaccagctcgcgcgggcggagggtattccgctcaccaccgccgccgcgcgaatcctc
gacaccgacgaacttaccccgcaggcgcggcgatcgctcggcaatctcgtgggcgacatg
gcacgctggcgcgcgatggcgggcgaattgccgcatgccgagctggcgcggcagttgctc
gacgagagcggctataccgcgatgctacaggccgaaaagtcggtcgaggcggcgggtcgg
ctcgagaacctgaccgaattggtgcgcgcgatggaggaatatgaaagcctcggcgcgttc
ctcgagcatgtcagcctggtgatggacaatgagaatcgccagcaggacgcgcaggtgacg
atcatgacgatccacgccgccaagggcctcgaatacgacacggtgttcctggtcgggtgg
gaggaaggcatcttcccctcgcagcgcgcgctcgacgaaggcgggctggcgagcctcgag
gaggaacgccgcctcgcctatgtcgcgatcacccgcgcgcggcgaaaggcgacgatcctc
cacgccgccaaccgccgtatctatggccaatggacgtccagcctgccctcgcgcttcgtc
gaggagctgccgcccgagcatatcgaggccgaaacgacgatgtcggggggcgaaagcctg
tggcgcgccaattggagcgagaatgccgatccgttttcggacgttgcgcgcggatcgggg
cgcgggcccggctggcagcgcgcggcgtcgacggggacattcgttcgcgagccgacgcgg
atcatcgaggcgcgagcgtctgcggtaagccttggcaacaaggggcgcagcgacgtctcg
gtggggttgcgcgtgttccaccagaaattcggctatggcagcatcgccgagatcgagggc
aacaagctcgagatcgatttcgagaccgcggggcgcaagcgggtgatggacagctttgtg
acggtggggtga
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integrated database retrieval system
