Sphingomonas qomolangmaensis: NMP03_06330
Help
Entry
NMP03_06330 CDS
T08594
Name
(GenBank) autotransporter domain-containing protein
Organism
sqo
Sphingomonas qomolangmaensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
PATR
Motif
Other DBs
NCBI-ProteinID:
UUL83808
LinkDB
All DBs
Position
1332253..1338723
Genome browser
AA seq
2156 aa
AA seq
DB search
MAGKFLAWSVRPRLVSFALGTSVLAITAGASPASAQCAPDPTSVNGTTTCSGVDTDGLNV
PTSGTRVVVQPGATVLAGSNAAGIATSGATSTLVVDGAVLGGVRPGISVTNANAYFGYLG
PCDPYAGATFTPCGSPFGTVSPPNATSISIGAAGTVSGTSAVRLQANPNNTAGTLTATIV
NAGTLTGTSGPALVADSGAYFTGITNQVGGRIEGIAGVTRSIDNFGTINRGIVVGAPANF
TFATLVTNAGTINGGVAGAIQSVRNTGTIDGGTGSAIAGIPASAFNNVQLNNDGRITSNG
NAATVTSTGGALVQNTGSIINAGTGAAIEASGILNVTNAAGATIGSNGSVAVRTSGVLNL
TNAGTIDGSVVSAGVANQNATLDIAAGTINGDLLLGASNDSVTARFDVAAGRIGSVTGVI
DAGSGADTLNLGIDGDATLNAAAVPASFERLGLAIADATVTLADGIRLPNGLTATGSGNL
VNAATLVTAGQAIAISASYPGTLSLVNNGAITANVTNSFGAAVSVNVGELTNNGTITAIG
GGGISVTSYTQNALTNTGTITASGFGALVYSGALVNSGTIRSTGNVGSVLNGSQSNSAPS
SNSGLIAGATSGLSMSFGRFVNTGIVTGGATGSGVGIDITYYGIVDNQAGGTISGATGIS
ARTGYNGTVLNAGTINGGVDFESRSSYDQSPDIFVDNGGVVNGAIRFGGGNDLLVTDLVQ
PTARVLGGATGGVDAGDGLDRILYRVGADAAVQIAPPAGFETIGYELTNDAALTLTATGL
LDTNLTLSGSGKADVTADIAAANRTLIDMSALTIDRLLGDSDAAPNTLDVISRGTLTASA
TDSFAYLPTHAVIAGPGRFENAGTINVTGTPSEYFYFTPFAIVGSGTVINSGTINLAGGA
YGIDAPTVINSGSILSSAGSGSSGVLGVETLQNSGSIVTDGPAVAGTYFYSVPSQITNTG
RIESRRDTALSVYGGSNILNDIGGLIQGPTQAIVAYGSTLINRGTIVGDVDLASDLGYTS
SSYGADGGTLAGALTFGGGNDVFVQTGAATGITDVIDGGEGSDAVILARNGAGSFTGAIN
FETLAVNAGIWTLTGAQRYSGGTTIAAGAIAIGTGSVLNGAIANAGALVFDQSTNTGFTG
AITGTGSVTKAGTGVLTLGTQGYSGATNVTGGTLALTGALASSDYMVGAGAALTSANAAT
IATTGQTLSVLNAGTIANTNASGRAINVAGVNGPRTIAIVNAAGGVITSADDAIRINTNP
TAGSIRIDNSGTIRTTGGGQALDFDAAASGAASIIINNHVTGVIRSFGQDAIRPGQGAIV
TNAGLIRSDGAPNNSYDGIDWQARSGVVTNLATGIVSGLRHGITSDTAVDVANAGVIEGR
NGSGVGSDGTGMVVNYGTITGAWAGVATNGDGDGVDIDLIGTVRNFGTIRGLSANGVDSG
GQPNGAEGIAMGGGTIENAAGATISGATRGILIDNGSASSAYGATTIVNAGTIQGGTGAA
ATLVGAFDDVIINSGNIVGGSNGLASDFGAGNDTLALLPGSAIIGRVDGGAGTDQIVLGG
TGTGSFAGAVNFERLDIVSGDWSLTTASSFANGAGIAAGATLAGTTATLRGAIANAGTLR
IDQAGDGVFDATLLGTGELVKAGAGNVTIGNQLGFTGRTSIEAGRLTLAGTLPSKVTVQA
GATLGGNGTVASAVVASGGTIAPGNSIGTITIAGNLVQQAGSVYAAEIGAAGLSNRIVVG
GTATLQSGARLAITGTAGAIGTRYTLLTATGGVAGTYAVTQPTTTDTELRLGYTGNAVVA
DVARTGTGLTRVARTTNQRAVAPAFAALGIGNAAYAALTLVPDNDAVARAFDALGGEVHA
SLRNAMVRDAQIVQGAVLSRTLAGDPSSGLWGTVLANSGQDDGSIEAAAVDRETLGGVGG
VDIMAGTGRIGIAGGYTRTQLAVDARTSDAEAKTIHVLGYAGGAYGAIRVRAGIGYAWAD
NRTDRSVAFPGFADRLRGDYDGDTFHSFAEAGYAIPLGGGTVQPFAGFQAFRVHTDGVAE
AGGVTALTIAERTESFAFASAGLRFDTPIVDGLSARGVTAWQRRIDGDAPSGAARFTAGT
STFDIAGVPLSRDAVNAGIDIVWAPTPNIRVTSGYAGLIGTRGTDSTFKLTASIGF
NT seq
6471 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaagtttttggcgtggtcggtcaggccgcgtctcgtgtcgttcgcactcggc
accagcgtcctcgccatcaccgccggggcatcccccgcgtcggcgcagtgcgcgcccgat
ccgaccagcgtcaacgggaccactacctgcagcggcgtcgacaccgacgggctcaatgtc
cctaccagcggcacccgtgtcgtcgtccagcccggcgcgaccgtgcttgccggatccaat
gcggcggggatcgcgacatcgggtgctacgtcgacgctggtcgtcgacggcgccgtcctg
ggcggcgtccggcccggcatcagcgtcaccaatgccaatgcatatttcggctatctcggc
ccctgcgatccctatgcgggtgcaaccttcaccccttgtggcagtcccttcggcaccgtg
tcgccgcccaacgcgacatcgatcagcatcggtgcggcgggaacggtcagcgggacctcc
gcagtccgtttgcaggccaaccccaacaacaccgcgggcacgctcaccgcaacgatcgtc
aacgccggcacgctgaccggaacgagcggccccgcgctggtcgccgacagcggcgcctat
ttcaccgggatcaccaaccaggtgggggggaggatcgaggggatagcgggggtcacgcga
tcgatcgacaatttcggaacgatcaaccgcggtatcgtcgtcggtgccccagccaacttc
accttcgccacgctcgtcaccaacgccggaacgatcaacggcggggtcgccggtgcgatc
caatcggtccggaacacgggcacgatcgatggtggcaccggatcggcgatcgcgggaatt
cccgcatcggcgttcaataacgtccagctcaacaatgacggtcgcatcacctcgaacggc
aatgcggcaacggtgacgtcgaccgggggggcactcgtccagaacaccggcagcatcatc
aacgcgggtaccggcgcggcgatcgaggccagcggcattctcaacgtcaccaacgccgca
ggtgcgacgatcggcagcaacggcagcgtcgcggtccgcaccagcggggtcctgaacctc
accaatgcggggacgatcgacggatcggttgtctcggccggagtcgcgaaccagaatgcc
acgctcgacatcgccgcgggcacgatcaacggcgacctgctgctcggtgcgagcaacgat
agcgtcactgcgcggttcgacgtcgcggccgggcggatcggcagcgttaccggcgtcatc
gatgccggcagcggcgccgacaccctcaatctcgggatcgacggcgatgctacgctcaac
gctgccgcggtaccggcgagcttcgaacggctcggcctggcgatcgccgatgcaactgta
acgcttgctgacggtattcggctgcccaacgggctgaccgcgaccggatcgggcaatctg
gtcaacgccgcgacgctggtcaccgccgggcaggcgatcgcgatatcggcgagctacccc
ggcacattgtccctggtgaataacggcgcgatcaccgcgaacgttaccaacagctttggc
gcagccgtctcggtcaatgtcggggagctcaccaataacggcacgatcactgcgatcggc
gggggtggcatcagcgtcacgagctacacccagaacgcgctgaccaacaccggtacgatc
accgcatcgggctttggcgcgcttgtctattcgggtgcgctggtgaacagcggcacgatc
cgatcgaccggcaatgtcggctcggttctgaacgggtcgcagtcgaactccgcgccttcg
agcaacagcggcctgatcgcgggtgccaccagcggcctgtcgatgtcgttcggacggttc
gttaacaccggcatcgtgaccggcggcgcgaccggcagcggcgtagggatcgatatcacc
tattacggaatcgtcgacaatcaggcgggcggcacgatcagcggcgcgacggggatcagc
gcgcgcaccggttataacggcaccgtcctgaatgctgggacgatcaacggcggggtcgat
ttcgagagtcgctcttcttacgaccaatcgcccgacatcttcgtcgacaatggcggcgtg
gtgaacggcgcgatccggttcggcggcggcaacgacctgctcgtgaccgatctggtgcaa
cccacggccagggtcctgggcggcgcgaccgggggcgtcgacgcgggcgacgggctggac
cgcattctctaccgcgtcggcgccgatgcggcagtgcagatagcgccgccagcagggttc
gagacgatcggctacgagttgacgaacgacgcagcactgacgctgacggcgaccggcctg
ctcgacaccaacttgaccctgtcgggcagcggcaaggcagatgtcaccgcggacatcgct
gcagcgaaccggacgctgatcgacatgtcggcgttgaccatcgatcggttgctcggcgat
tccgatgcagcgccgaacacgctcgacgtgatcagccgaggcacgctgaccgcgtcggca
accgattcgtttgcctatctgccgacccatgcggtcatcgcagggccgggccggttcgag
aatgccggcacgatcaacgttaccggcaccccatccgagtatttctattttacccctttc
gcgatcgtcggcagcggcacggtaatcaactcggggacgatcaatcttgctggcggagct
tatggcatcgacgccccgacggtcatcaattcgggcagcatcctgagcagcgccggatcg
gggagcagcggcgtgctgggggtcgagacgttgcagaacagcggcagcatcgtcaccgac
ggtccggcggtcgctgggacctatttctattcggtgccgagccagatcaccaataccgga
cggatcgagagccgacgagacaccgcgctgtccgtctatggcggatcgaacatcctgaac
gacatcggcggtctgatccagggacccacccaggcgatcgtcgcctatggcagcacgctc
atcaaccgcggcacgatcgtcggcgacgtcgatctggcaagcgaccttggctataccagc
tcgagctatggcgccgatggcggcacgctggcaggcgcgctcacctttggtggaggcaat
gacgtcttcgtgcagaccggcgccgcaaccgggatcacggacgtgatcgacggtggcgaa
ggttccgacgcggtcatcctcgcgcggaacggcgcgggcagcttcaccggcgcaatcaac
ttcgagacgctggcggtgaatgcggggatctggacgctgaccggcgcgcaacgctattcg
ggcggcacgacgatcgctgcgggagcaatcgcgatcggcaccggatcggtcctgaacggt
gcgatcgcgaatgccggcgctctggtgttcgaccagagcaccaacaccggcttcaccggc
gcgatcaccggcaccggcagcgtgacgaaagctggcaccggggtgctgacgctcggcacg
caaggctatagcggggcgacgaacgtcaccggcggcacgctggcgctcaccggcgcgctc
gccagctccgattatatggtcggcgcaggcgcggccttgaccagcgcgaacgccgcgacg
atcgcgaccaccgggcagactttgtcggtcctcaacgcaggcacgatcgccaacaccaat
gcgagcgggcgtgcgatcaacgtggccggcgttaacgggccgcgcacgatcgcgatcgtc
aacgccgcgggcggcgtcatcaccagcgccgacgacgcgatccggatcaataccaacccg
actgcgggcagtatccggatcgacaattccggcacgatccggacgaccggtggcggccag
gcactcgatttcgatgcggcggcatcgggtgcggcgtcgatcatcatcaacaatcatgtg
accggcgtcatccgctcgttcggccaggatgccatccgcccgggccagggcgcaatcgtc
accaatgccgggctgatccgttccgatggcgcccccaacaacagctatgacggcatcgac
tggcaggcgcgctcgggcgtcgtgaccaatttggcgacgggcatcgtctctggcctgcgc
catggcatcaccagcgacaccgcggtcgatgtggccaacgctggggtaatcgagggtcgc
aacggctcgggcgtcggctcggacggcaccggcatggtcgtcaattacggcacgatcact
ggcgcgtgggccggcgtggcgaccaatggcgacggagacggcgtcgatatcgacctgatc
ggcacggtgcgcaatttcggtacgatccgcgggctcagcgccaacggcgtcgattcgggc
ggccagccaaatggcgccgagggcatcgcgatgggcggtggcacgatcgagaacgcagcc
ggcgcgaccatctctggcgcgacgcgggggatcctgatcgacaacggctcggccagcagc
gcctatggtgcgacgacgatcgtcaacgccggcacgatccagggcggcaccggcgcggcg
gccaccctagtcggcgcattcgacgatgtaatcatcaattcgggcaatatcgtcgggggc
agcaacgggctggcgagcgatttcggcgcgggcaacgacacgcttgcgctgctgccgggc
tcggcgatcatcggccgcgtcgacggcggtgcgggcaccgaccagatcgtgctcggcggg
acgggcacgggcagctttgcgggcgcggttaacttcgaacgtctcgatatcgtctccggc
gactggtcgctgaccacggcatcgagcttcgcgaacggcgcgggcatcgccgcgggcgca
acgctagccggcaccacggcgaccttgaggggcgcgatcgcgaacgccggtacgttgcgt
atcgaccaggcgggcgacggcgtcttcgatgcgacgctcctcggcacaggcgagctcgtc
aaagccggggccggcaatgtcacgatcggcaatcagcttggcttcaccggccgcaccagc
atcgaggccgggcgcctgacgcttgcaggcacgctaccctcgaaggttacggtgcaggcg
ggcgcgacactgggcggcaacggcaccgtcgccagcgcggtcgtcgccagtggtggaacg
atcgcgccgggcaacagcatcgggacgatcacgatcgccggcaatctcgtgcagcaagcg
ggctcggtctatgcggccgagatcggcgccgccggcctgtcgaatcggatcgtcgttggc
ggtaccgcgacgttgcagtcgggcgcacggctcgccatcaccggcaccgcgggcgccatc
ggcacccgctacacgctgctcaccgcaacaggcggcgttgctggcacctatgccgtcacc
cagccgacgaccaccgacaccgagctgcgactgggctataccggcaacgccgtggtcgcc
gatgtcgcgcgcaccggtaccggcctcaccagggtcgcccgcaccaccaaccagcgcgcc
gtagcgcccgcctttgccgcgctcggcatcggcaacgccgcctatgccgcgctgacgctg
gtgcccgacaacgacgccgtggcgcgtgcgttcgatgcgctcggcggcgaagtccatgca
tcgctgcgcaacgcgatggtccgcgatgcgcagatcgtccagggcgcggtcctgtcgcgg
acgctcgccggcgatccgtcgagcgggctatgggggaccgtgctcgccaacagcggtcag
gacgatggcagcatcgaagcagccgcagtcgaccgcgaaacgctcggcggcgtcggcggc
gtcgacatcatggcgggcacgggccggatcggcatcgcgggtggctatacccgcacgcag
ctcgcggtcgatgcgcgcaccagcgacgccgaggcaaagacgatccatgtgctcggctat
gcgggcggtgcctatggcgcgatccgcgttcgtgccgggatcggctatgcctgggccgac
aaccgcaccgaccggtcggtggcgtttccggggttcgccgatcgcctgcgcggagactat
gacggcgataccttccacagcttcgccgaggcggggtatgcgatcccgctgggtggcggc
accgtccagcccttcgccggtttccaggcgttccgcgtccacaccgacggcgtcgccgag
gcgggcggcgtgaccgcgctaaccatcgcggaacgaaccgaatccttcgcgttcgccagc
gccgggctgcggttcgacacgccgatcgtcgacggtttgtcggcacgcggcgtcaccgcc
tggcaacggcgaatcgacggtgatgcaccaagcggcgcggcccggtttaccgcgggcacg
tcgaccttcgacatagccggcgttcccctgtcgcgcgatgcggtgaatgccgggatcgat
atcgtgtgggcgcccaccccgaacatccgggtgacatcgggctatgccgggctgatcggc
acccgcgggaccgacagcaccttcaagctgaccgccagtatcggtttctga
DBGET
integrated database retrieval system
