Sphingomonas qomolangmaensis: NMP03_06365
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Entry
NMP03_06365 CDS
T08594
Name
(GenBank) RNA polymerase sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
sqo
Sphingomonas qomolangmaensis
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sqo03021
]
NMP03_06365
Transcription machinery [BR:
sqo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NMP03_06365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
TPR_20
HOOK_N
GerE
Motif
Other DBs
NCBI-ProteinID:
UUL83814
LinkDB
All DBs
Position
complement(1349944..1350507)
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AA seq
187 aa
AA seq
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MSDTAGPSDAELAAAARAGDQRAFAAIVTRHKAALHRLVARIIGDREQALDVVQESFVAA
FGALGRYDPARPMHAWLSRIAINKARDWQRRQAVRRFVGAVLPFAADSAEVATDQPGPDR
IAEGRAAVAELERAIAALPHRLREVLVLRTIEGLDQAETAGLLGISAKAVETRLYRARAR
LAELLEG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacacggcggggccgagcgacgccgaactggcggcggcggcgcgcgcgggcgat
cagcgcgcgttcgccgcgatcgtcacgcggcacaaggcggcgctgcaccggttggtcgcg
cggatcatcggtgatcgcgaacaggcgctcgacgtcgtgcaggaaagcttcgtcgccgcc
ttcggcgcgctcgggcgctacgaccccgcgcggccgatgcacgcatggctcagccggatc
gcgatcaacaaggcgcgcgactggcaacggcggcaagcagtgcgccgctttgtcggcgcg
gtgctgcccttcgccgccgatagcgccgaggtcgcgaccgaccagcccggccccgatcgg
atcgccgaggggcgcgccgcggtcgccgagctcgagcgggcgatcgcggcgctgccgcac
cggctgcgcgaggtgctggtgctgcggacgatcgaggggctcgatcaggcggaaaccgcc
gggctgctggggatcagcgcgaaggcggtcgaaacgcggctgtatcgcgcgcgggcgcgg
ctggccgaattgcttgagggataa
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