Sphingomonas qomolangmaensis: NMP03_06570
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Entry
NMP03_06570 CDS
T08594
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sqo
Sphingomonas qomolangmaensis
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sqo03032
]
NMP03_06570
03036 Chromosome and associated proteins [BR:
sqo03036
]
NMP03_06570
03400 DNA repair and recombination proteins [BR:
sqo03400
]
NMP03_06570
DNA replication proteins [BR:
sqo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NMP03_06570
Chromosome and associated proteins [BR:
sqo03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
NMP03_06570
DNA repair and recombination proteins [BR:
sqo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
NMP03_06570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
UUL83853
LinkDB
All DBs
Position
1393254..1393532
Genome browser
AA seq
92 aa
AA seq
DB search
MIRSELVQLLVRDNPDLSIRDVERIVNVFFDEIVHRLSDDGRVELRGFGAFSTRARDARS
GRNPRTGESVSVDAKRVPYFKPGKEMRLRLNT
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgatccgttccgagctcgtccagttgctcgtccgcgacaaccccgacctgtcgatccgc
gatgtcgagcgcatcgtgaacgtgttcttcgacgagatcgttcaccgcctgtcggatgac
ggccgcgtcgaactacgcgggttcggtgccttcagcacccgcgcccgtgacgcgcgcagc
ggtcgcaacccgcgcaccggcgagtcggtctcggtcgatgccaagcgcgtcccctatttc
aaaccgggcaaggaaatgcgcctgcgcctgaacacgtaa
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integrated database retrieval system
