KEGG   Sphingomonas qomolangmaensis: NMP03_07040
Entry
NMP03_07040       CDS       T08594                                 
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
  KO
K02453  general secretion pathway protein D
Organism
sqo  Sphingomonas qomolangmaensis
Pathway
sqo03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sqo00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NMP03_07040 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sqo02044]
    NMP03_07040 (gspD)
Secretion system [BR:sqo02044]
 Type II secretion system
  General secretion pathway protein
   NMP03_07040 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: UUL83940
UniProt: A0ABY5LDM2
LinkDB
Position
1483804..1485888
AA seq 694 aa
MAKRTLLLLALAATALQPLAAQEGPPGDIVVNMRGVEIADVADQISRLTGRTLILDPAVR
GTVTVTSAQPLSAAGVWELFQSVLRANGFAAVQSGRAWRIVPQANAVRDGGVRRSGAGQE
LTTRMIRLSNVPAAEAARIARPLVATFGSVEPLASPNAIVVTDYADNVRRIESLMRSLDG
GGGQTFATIPLRNGSAPEVAAAISQVLGDGEAGGARVAADPRSNIVVVRGTPSSVAEARR
IAISLDTPGGATPITRVFRLNYADAESVTDVLRGVLGQEGEASNPVARSLQSRGTRGGLS
STNRSPTATLSGLVNSNNAGAAAAALGGAGGLGGGGGMTGGGGGISTVGEGQREQPAQGF
STPELTVQPAPDINAIVVRGTPTAVASMETIVADLDVRRPQVILEAAIAEITGTEAEQLA
VQIGSSGAVVNQFEGVATSFGANNGVSLRTILGALGVPAAALLGEGLSGNLAIGNDFSIL
VQALGVSDKSNLLSTPSVTVVDNKVGEIVVAQEVPFITGSILTDNAGVTPYTSVERKDVG
ITLRVLPRINAGDTIRLEISQEASSIAQTQLSSATDIITNRRAINTTVLADNGRTIVLGG
LISDDYARQKSQVPILGDIPILGEFFKSRRESRTKRTLFIFLKPTILRSSDETAAASDER
YQRLRGDESYLSERRSLLLKPPAPRLTVEIDGIY
NT seq 2085 nt   +upstreamnt  +downstreamnt
gtggccaaacgcaccctattgctcctcgcgctcgccgcgaccgcgctccagccgctcgcc
gcgcaagaggggccgccgggcgacatcgtcgtcaacatgcgcggggtcgagatcgccgat
gtcgccgaccagatttcgcggctgacggggcggacgctgatcctggatcccgcggtgcga
ggcacggtcacggtgacgtcggcgcagccgctgtcggcggcgggggtgtgggagctgttc
cagtcggtgctgcgcgccaacggctttgccgcggtgcaatcggggcgcgcgtggcgaatc
gtgccgcaggccaatgcggtgcgcgacggcggggtgcggcgttcgggcgcggggcaggaa
ctgacgacgcggatgatccggctgtcgaacgtgcccgccgccgaggcggcgcggatcgcg
cggccgctggtcgcgaccttcggatcggtcgagccgctcgccagcccaaacgcgatcgtc
gtgaccgactatgccgacaatgtgcggcggatcgaatcgctgatgcgcagcctggacggc
ggcggcggccagaccttcgcgacgatcccgctgcgcaacggatcggcgcccgaagtggcg
gcggcgatcagccaggtgttgggtgacggcgaagccggcggcgcgcgcgtcgcggccgat
ccgcgcagcaacatcgtggtggtgcgcggcacgccttcgtcggtggccgaggcacggcga
atcgcgatctcgctcgacacgccgggcggggcgacgccgatcacgcgggtgttccgcctg
aactatgccgatgccgagagcgtcaccgacgtgctgcgcggggtgctggggcaggaaggc
gaggcgagcaatccggtcgcgcggagcctgcagtcgcgggggacgcggggtgggctgtca
tcgaccaaccgaagcccgaccgcgacgctctcggggctggtcaattcgaacaatgcgggt
gctgcggcagcggcgctcggcggtgcaggaggacttggcggcggcggcggcatgaccggc
ggcgggggtggcatcagcaccgtcggcgaaggccagcgcgagcaacctgcgcagggtttt
tccaccccggagctcaccgtccagcccgctcccgacatcaacgcgatcgtcgtgcgcggc
accccgaccgcggtggcgagcatggaaacgatcgtcgccgatctcgacgttcgccggccg
caggtgatcctcgaagccgcgatcgccgagatcaccggtaccgaagccgaacagctagcg
gtgcagatcggttcgtcgggcgcggtggtcaatcagttcgaaggcgtagcgacgtcgttc
ggagcgaataacggcgtgtcgctgcgcacgatcctgggcgcgctcggcgttcccgccgct
gcgctgctcggcgaaggactcagtggcaacctggcgatcggcaatgatttctcgatcctt
gtccaggcgctgggcgtctcggacaaatcgaacctgctgtcgacaccgtcggtgacggtg
gtcgacaacaaggtgggcgagatcgtggtggcgcaggaagtgccgttcatcaccgggtcg
atcctgaccgacaatgccggcgtaacgccttatacctcggtcgagcgcaaggatgtcggc
atcacgctgcgggtgctgccgcggatcaatgcgggcgacacgatccggctcgagatcagc
caggaagcctcgtcgatcgcgcagacgcagctgagcagcgcgaccgacatcatcaccaac
cggcgcgcgatcaacaccacggtactggcggacaatggccggacgatcgtgctcggcggg
ctgatcagcgacgattatgcgcggcagaaaagccaggtgccgatcctgggcgatatcccg
atcctgggtgaattcttcaaatcgcgccgcgaatcgcggaccaagcggacgctgttcatc
ttcctgaagccgacgatcctgcgatcgagcgacgaaaccgcagcggcatcggacgaacgc
tatcagcggctgcgcggcgacgaatcgtacctgagcgagcgtcgcagcctgttgctcaag
ccgccggcgccgaggctgacggtcgagattgacgggatctattga

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