Sphingomonas qomolangmaensis: NMP03_08640
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Entry
NMP03_08640 CDS
T08594
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sqo
Sphingomonas qomolangmaensis
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sqo03400
]
NMP03_08640 (radA)
DNA repair and recombination proteins [BR:
sqo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NMP03_08640 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
ChlI
RecA
Lon_C
AAA_16
AAA_22
AAA_5
AAA_30
AAA
NTPase_1
nSTAND3
AAA_14
CbiA
AAA_29
DUF7125
ATPase_2
AAA_24
SLFN-g3_helicase
Glyco_hydro2_C5
Rad51
NACHT
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
UUL81296
LinkDB
All DBs
Position
complement(1840664..1842037)
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AA seq
457 aa
AA seq
DB search
MAKPQKKYVCQACGSATSKWAGQCADCGEWNTLVEDAGAVVTAFSARHNLQGGGRPILLS
GLDSEIALPERMATGIAELDRALGGGFVESSATLIGGDPGIGKSTLLLQAAAKLALAGKS
VAYVSGEEAADQVRLRARRLGLGNAPVQLAAATSVRDILTSFGGAAAPDLLVIDSIQTMH
SDLIEGAAGTVSQVRASAGELIRFAKERGTAVVLVGHVTKDGSLAGPRVMEHMVDTVLAF
EGERSHQYRILRAIKNRFGGTDEIGVFSMETQGLSEIANPSSLFLTSRDESVTGTVVFPA
LEGTRPVLVEVQALIVRLASGATPRRAVVGWDSGRLAMILAVLEARCGLSFSTCEVYLNI
AGGYRVQDPAADLAVAAALVSALSERAVPVDSVGFGEIALSGEIRPVAHANLRLKEAAKL
GFASALLPSAQATEPGTMKLAGFKNLGAFVDHMLARG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggccaagccccagaagaaatatgtctgccaggcgtgcggatcggcgacgtcgaaatgg
gcgggccaatgcgccgattgcggcgagtggaatacgctggtcgaggatgccggtgcggtc
gtcaccgcgttttctgcgcggcataatctgcagggcggcgggcggccgatcctgctgtcg
gggctcgacagcgaaatcgcgctccccgagcgcatggcgacgggcatcgccgagctcgat
cgcgcgctggggggcggattcgtcgaatcctcggcgacgctgatcggcggcgatccgggg
atcggcaagtcgaccttgctgctccaggcggcggccaagctggcgctggcgggcaagtcg
gttgcctatgtctcgggcgaggaggctgccgaccaggtgcggctgcgcgcgcggcggttg
gggctcggcaatgcgccggtgcagctcgcggcggcgacctcggtgcgcgacatcctcacg
agctttggcggcgccgcggcgcccgatctgctggtgatcgattcgatccagacgatgcat
tcggacctgatcgagggcgcggcgggcaccgtcagccaggtgcgcgcatcggcgggcgag
ctgatccgcttcgccaaggagcgcggcaccgccgtcgtgctggtcggccacgttaccaag
gacggcagcctcgccgggccgcgggtgatggagcatatggtcgataccgtgctggcgttc
gagggcgagcgcagccaccaatatcgcatcctgcgtgcgatcaagaaccgcttcggcggc
accgacgagatcggggtgttctcgatggagacgcaggggctgagcgagatcgccaaccca
tcgtcgctgttcctcacctcgcgcgacgaaagcgtcaccggcaccgtggtgtttcccgcg
ctagagggcacccgcccggtgctggtcgaagtccaggcgttgatcgtccggctggccagc
ggagcgaccccgcgtcgcgcggtggtcggctgggattcgggacggctggcgatgatccta
gcggtgctcgaagcgcgctgtgggctcagcttttcgacctgcgaagtgtatctcaacatc
gccggcggctatcgcgtgcaggacccggcggctgatctcgcggtggccgcggcgttggtg
tcggcgctgtccgaacgcgcagtgcccgtcgattcggtcgggttcggcgaaatcgcgctg
tcgggcgagatccgccccgtcgcccacgccaatctgcggctgaaggaagccgccaaattg
ggcttcgccagcgcgctgctgcccagcgcgcaggccaccgagcccggcacgatgaagctg
gccgggttcaagaacttgggcgccttcgttgaccatatgctggcgcgcggctag
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