Sphingomonas qomolangmaensis: NMP03_08860
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Entry
NMP03_08860 CDS
T08594
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sqo
Sphingomonas qomolangmaensis
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sqo03009
]
NMP03_08860
Enzymes [BR:
sqo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
NMP03_08860
Ribosome biogenesis [BR:
sqo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
NMP03_08860
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UUL81333
UniProt:
A0ABY5L6V1
LinkDB
All DBs
Position
1883216..1884349
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AA seq
377 aa
AA seq
DB search
MNDTPQMLPEQSPESANVRQFIVHAEDDGIRLDRWFKRHLPDTSFNLVSRWARTGQLRVD
GARATPGDRVLSGQAIRVPPADPARPVAPRATPQRVALTPEEAAFAQSLVIHMDEQALVL
NKPPGLATQGGTKTHDHVDRLLDGLWYEHEGRPKLVHRLDKDTSGALLIARTARAATLFA
KNFSNRSAKKIYWALVVGVPEIHDGVIELPLAKQPGSGGEKMHVDEEEGAPAKTRYRVIE
RAGNRAAWVELQPYTGRTHQLRVHLAAIGHPIVGDGKYGGQEAFLTGGISRKMHLHARRI
RIDHPEGGKLDVTAPLPTHIAESIDMLGFDISKGDVLIDTGPPPATREEKKQKARTHAKN
LRKERRGERRGRGAETK
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaacgataccccccaaatgctccccgagcagagccccgaatcggccaatgtccgccag
ttcatcgtccatgccgaggacgacggcatccgcctcgatcgctggttcaagcggcatctg
cccgacaccagcttcaacctcgtctcgcgctgggcgcgtaccgggcagctgcgcgtcgat
ggcgcgcgcgcgacgccgggcgaccgggtgctgtcgggccaggcgatccgcgtgccgccg
gccgatcccgcgcgaccggtagcgccgcgcgcgacgccgcagcgggtcgcgctgacgcca
gaggaggcggccttcgcgcagagcctggtgatccacatggacgaacaggcgctggtgctc
aacaagccgccggggctggcgacgcaaggcggcaccaagacccatgaccatgtcgatcgg
ctgctcgacgggctgtggtacgaacatgaaggccggcccaaattggtccaccggctcgac
aaggatacctcgggcgcgctgttgatcgcacgaacggcacgcgccgcgacattgttcgcc
aagaatttctcgaaccgcagcgccaagaagatctactgggcgctggtggtgggggtgccc
gaaatccatgacggcgtgatcgaactgccgctggccaagcagccgggatcgggcggcgag
aagatgcatgtcgacgaggaagagggcgcccccgccaagacgcgctaccgcgtgatcgag
cgcgcgggcaatcgcgccgcctgggtggagctgcagccctataccgggcggacgcaccag
ctgcgtgtccatctggcggcgatcggccatccgatcgtcggcgacggcaaatatggcggg
caggaagcgttcctgaccggcggcatctcgcgcaagatgcacctccacgcgcggcgaatc
cggatcgaccatcccgagggcggcaagctcgacgtcaccgccccgctgccgacgcatatc
gccgagagcatcgacatgctgggcttcgacatttcgaagggcgacgtgctgatcgacacc
ggcccgccgcccgcgacgcgcgaggaaaagaagcagaaggcgcgcacccacgccaagaat
ctgcgcaaggaacgccgcggcgagcggcggggccgcggggccgagaccaagtga
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