Sphingomonas qomolangmaensis: NMP03_11425
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Entry
NMP03_11425 CDS
T08594
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
sqo
Sphingomonas qomolangmaensis
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sqo03400
]
NMP03_11425
Enzymes [BR:
sqo01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
NMP03_11425
DNA repair and recombination proteins [BR:
sqo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
NMP03_11425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UUL81806
LinkDB
All DBs
Position
complement(2408437..2409960)
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AA seq
507 aa
AA seq
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MTILIPVLGDQLSDTLSSLQDVDRADAVVLMMEVVEEATYVLHHQRKIALLFAAMRHHAQ
RLRAAGWRVDYVTLDDPDNEGGFSAEVARAVERHSPERIVVTEAGEWRVRAMLESWEDRF
DCAVEIRSDDRFVASHADFEQWAADKKQLRMEFFYRGMRRKTGLLLDADGKPEGGAWNYD
AENRKPAKKGARPPRPLSFAPDAITREVLALVADRFGDHIGDLEGFDFAVTPQDALAQRE
HFLTHALASFGDYQDAMVTGEPFLWHAVLSPYINCGLLDPLDLCRQVEKRYRAGAVPLNA
AEGFIRQIIGWREYVRGIYWREGPDYAERNFLNAQRDLPGFYWTGDTDMHCMAQAIGETI
DHAYAHHIQRLMITGNFALLIGADPAQVQRWYLEVYADAYEWVEAPNVLGMSQFGDGGLL
ASKPYASSGAYINRMSDYCGHCRYDVKQRLGDDACPFNALYWDFLARNRGKLGDNQRLGM
PYRNWDRMDAETQDALRQQAAGFLDRL
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcctgatcccggtgctgggcgatcagctgtcggacaccctctcgtcgctgcaa
gacgtcgaccgcgccgacgcggtagtgctgatgatggaggtggtcgaagaggcgacctac
gtcctgcaccatcaacgcaagatcgcgctgctttttgctgcgatgcggcatcatgcgcag
cggctgcgcgcggcggggtggcgcgtcgactatgtgacgctcgacgaccccgataacgag
ggcggcttttccgccgaggtcgcgcgtgcggtcgagcggcattcgcccgaacggatcgtc
gtcaccgaagccggcgaatggcgggtgcgcgcgatgctcgaatcctgggaggatcgcttc
gattgcgcggtcgagatccgctccgacgatcgcttcgtcgccagccatgccgatttcgag
caatgggcggcggacaagaagcagctgcggatggaattcttctaccgcggcatgcggcgc
aagaccgggctgctgctcgatgccgacggcaagcccgagggcggcgcgtggaattacgac
gccgagaaccgcaagcccgcaaagaagggtgcgcgcccgccgcggccgctgtcgttcgcg
cccgacgcgatcacccgcgaggtgctggcgctggtggcggaccgcttcggcgaccatatc
ggcgacctcgaggggttcgacttcgcggtgacgccgcaggacgcgctggcgcagcgcgag
catttcctcacccatgcgctggcgagcttcggcgattatcaggacgcgatggtcaccggc
gagcccttcctgtggcacgcagtgctgtcgccctatatcaattgcgggctgctcgacccg
ctcgatttgtgccgccaggtcgagaaaagatatcgcgcgggcgccgtgccgctcaacgcc
gccgaggggttcattcggcagatcatcggctggcgcgaatatgtccgcggcatctattgg
cgcgagggccccgactatgccgagcgcaatttcctgaacgcgcagcgtgacctgccgggc
ttctactggaccggcgacaccgacatgcactgcatggcccaagcgatcggcgagacgatc
gaccatgcctatgcgcaccatatccagcggctgatgatcacgggcaatttcgcgctgctg
atcggcgccgatcccgcgcaggtccagcgctggtatctcgaagtctatgccgacgcctat
gaatgggtcgaggcgcccaatgtgctggggatgagccagttcggcgatggcgggctgctg
gcgtcgaagccctatgcctcgtcgggcgcctatatcaaccggatgtccgattattgcggc
cattgccgctacgacgtgaagcagcggctgggcgacgatgcctgtccgttcaacgcgctg
tattgggatttcctggcgcgcaatcgcggcaagctgggcgacaatcagcggctggggatg
ccgtatcgcaactgggaccggatggatgccgagacgcaggatgcgctgcggcagcaggcg
gcggggtttttggatcgcctttaa
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