KEGG   Sphingomonas qomolangmaensis: NMP03_12020
Entry
NMP03_12020       CDS       T08594                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
sqo  Sphingomonas qomolangmaensis
Pathway
sqo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sqo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    NMP03_12020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sqo03400]
    NMP03_12020
Enzymes [BR:sqo01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     NMP03_12020
DNA repair and recombination proteins [BR:sqo03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     NMP03_12020
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: UUL81912
UniProt: A0ABY5L542
LinkDB
Position
2527519..2528316
AA seq 265 aa
MTDTLKIASWNINSVRFRMAIVEQFLRDAAPDILCLQETKVVDGDFPHEPLRALGYAHIV
IHGQRMHHGVAILSKIPLVEDDRFDWQANGEARHVGVRLPNGLRIENVYVPAGGDVPDRE
VNPKFGQKLDFLERMTRWSEGLAGIPTLLVGDFNVAPLESDVWSHKQLLDVVSHTPIEVE
TLARLQAANDWVDLGRHFLPAPARLFTWWSYRAKDWAASDRGRRLDHMWASRDVAAKAVA
HRVHEDCRGWLKPSDHVPILTEFAF
NT seq 798 nt   +upstreamnt  +downstreamnt
atgaccgacacgctcaagatcgcttcgtggaacatcaattcggtgcggtttcgcatggcc
atcgtcgaacagttcctgcgcgacgccgcgcccgacatattgtgcctgcaggaaaccaag
gtggtcgacggcgacttcccgcacgaaccgctgcgcgcgctggggtatgcgcatatcgtc
atccacggccagcggatgcatcacggcgtcgcgatcctgagcaagatcccgttggtcgaa
gacgatcgcttcgactggcaggccaatggcgaggcgcggcatgtcggggtgcggctgccg
aacgggctgcggatcgagaatgtctatgtgccagcgggcggcgatgttcccgatcgcgag
gtgaaccccaaattcggccagaagctcgatttcctcgagcggatgacgcgctggtccgag
gggctggcggggattccgacgctgctggtgggcgatttcaacgtcgcgccgctcgaaagc
gatgtttggagccacaagcagttgctcgacgtggtgagccatacgccgatcgaggtcgag
acgctcgcgcggctgcaggcggcgaacgactgggtcgatctggggcggcatttcttgccc
gcgcccgcgcggctgttcacctggtggagctatcgcgccaaggattgggcggcgtcggat
cgggggcggcggctcgaccatatgtgggcgtcgcgcgacgtcgccgccaaggcggtggcg
caccgggtgcacgaggattgccgcggctggctcaagccatcggaccatgtgccgatcctg
accgagttcgcgttttga

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