Sphingomonas qomolangmaensis: NMP03_12595
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Entry
NMP03_12595 CDS
T08594
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sqo
Sphingomonas qomolangmaensis
Pathway
sqo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMP03_12595 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sqo03019
]
NMP03_12595 (recQ)
03400 DNA repair and recombination proteins [BR:
sqo03400
]
NMP03_12595 (recQ)
Enzymes [BR:
sqo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NMP03_12595 (recQ)
Messenger RNA biogenesis [BR:
sqo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NMP03_12595 (recQ)
DNA repair and recombination proteins [BR:
sqo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NMP03_12595 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UUL82017
LinkDB
All DBs
Position
complement(2636748..2638520)
Genome browser
AA seq
590 aa
AA seq
DB search
MPPAVLDALRTTFGFPAFRGVQADVVARVLAGERTLAVMPTGAGKSLTYQLPSVMLDGTC
LVVSPLIALMHDQLRAAEAVGIRAATLTSADDNRDETIARFRAGALDLLYVAPERASSEG
FRNLLGQAPLSLFAIDEAHCVSEWGHDFRPDYRLLRPLLDRFPDVPRLALTATADAHTRA
DILEQLGIPHDGMIVAGFDRPNIRYHIAPRASTTQQIADVVADNPGAGIVYVQSRAGTER
LAESLQKTGRPVRAYHAGLDPAIRRANQAAFVASEDMVMCATVAFGMGIDKPDVRFVAHA
GLPKSIEGYYQETGRAGRDGDPAVAHLFWGADDFAKARQRIGEVEPARQLGERVRLNALG
ALVETAGCRRAILLRHFGENPADQCGNCDNCLNPPAATDATQVARKFLSAVFRTGQMFGT
GYVEQVLLGQSTERSMTNGHENLSVWGIVEGEEAALLKPVARALLLRDALRANAHGGLEF
GPGARALLKGEATLSMIVPPKRERRRRGDASGGSEANPVGDPLFEALRVKRRELAQAAQV
PPYVIFHDSVLREMASNRPATLAALGRVAGVGSKKLDAYGQAFLAVIKDH
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgccccccgccgtcctcgacgcccttcgcaccaccttcggcttccccgcctttcgcggg
gtgcaggccgatgtcgtcgcgcgcgtgctcgcgggcgagcggacgctcgcggtcatgccc
accggcgcgggcaagtcgctgacgtaccagctgcccagcgtcatgctcgacggtacctgc
ctcgtcgtttcgccgctgatcgcgctgatgcacgaccagctccgcgccgccgaggcggtc
ggcatccgcgccgcgacgctcacttcggcggacgataaccgcgacgagacgattgcgcgc
ttccgcgccggcgcgctcgacctgctctatgtcgcccccgagcgtgcctcgtccgagggc
ttccgcaacctgctgggtcaagcaccgctcagcctgttcgcgatcgacgaggcgcattgc
gtcagcgaatgggggcatgactttcgccccgattaccgcctgctgcgcccgctgctcgat
cgcttccccgacgtgccacggctcgcgctcaccgccaccgccgatgcgcatacccgcgcc
gacatcctcgaacagctcggcattccgcatgacgggatgatcgtcgcgggcttcgaccgc
cccaatatccgctaccacatcgccccgcgcgccagcacgacgcagcagatcgccgatgtc
gtagccgacaatccgggcgcgggcatcgtctatgtccagtcgcgcgccggcaccgagcga
ttggccgaatcgctgcagaagaccggtcgcccggtacgcgcctatcatgccggcctcgat
cccgcgatccgccgcgccaaccaggccgccttcgtcgcatccgaagacatggtgatgtgc
gcgacggtcgcgttcgggatggggatcgacaagcccgatgtccgcttcgtcgcgcatgcc
gggctgcccaagtcgatcgagggctattaccaggaaaccgggcgcgccgggcgcgacggc
gatcccgcggtcgcgcatctgttctggggtgccgacgacttcgccaaggcgcgccagcgg
atcggcgaggtcgaaccagcccgccagctgggcgagcgagtccgcctcaacgcactgggg
gccttggtcgaaaccgcaggctgccgccgcgcgattttgctccgtcatttcggcgagaac
ccggccgaccaatgcggcaattgcgacaattgcctcaacccgcccgccgccaccgacgcc
acgcaagtggcgcgcaaattcctctccgcggtattccgcaccggccagatgttcggcacc
ggctatgtcgagcaggtgttgctcggccagtcgaccgagcggagcatgaccaacgggcac
gagaatctgtcggtttggggaatcgtcgagggcgaggaggcggcgttgctcaagccagtc
gcgcgcgcgctgctgctgcgcgatgcgctgcgtgccaatgcgcatggcgggctcgaattc
ggccccggcgcgcgcgcgctgctcaagggcgaggcgacgctgtcgatgatcgtccccccc
aagcgcgaacgccgccgccgcggcgacgcatcgggcggcagcgaggcgaaccccgtcggc
gatccgctgttcgaggcactgcgcgtgaaacgccgcgagctcgcacaggcggcgcaggtc
ccgccctatgtgatcttccacgattcggtgctgcgcgaaatggcaagcaaccgtcccgcg
acgctagccgcgctcggccgggtggcaggggtcggctcgaagaaactcgacgcctatggc
caggcgttcctggcagtcatcaaggaccactaa
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