Sphingomonas qomolangmaensis: NMP03_12910
Help
Entry
NMP03_12910 CDS
T08594
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sqo
Sphingomonas qomolangmaensis
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sqo03016
]
NMP03_12910 (truB)
Enzymes [BR:
sqo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NMP03_12910 (truB)
Transfer RNA biogenesis [BR:
sqo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NMP03_12910 (truB)
Prokaryotic type
NMP03_12910 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
UUL82077
LinkDB
All DBs
Position
2700415..2701404
Genome browser
AA seq
329 aa
AA seq
DB search
MHGWIILDKPLGLGSTQGVSAVKRALRSGGYAKAKVGHGGTLDPLATGVLPIAVGEATKL
AGRMLDASKEYDFTIGFGVQTDTLDLEGKAVATSDVRPTMAAVEAVLGRFTGPIEQVPPA
YSALKVGGERAYDLARAGGEVVLATRSVTVHDLRFSPATGRWRADGATEGEDAQVFASPP
PPSAFGSHLPLAGEEIGEVTLAAHVSKGTYIRSLARDIAIALGTVGHVTMLRRTRAGPFG
LDTAISLDKLAEMANARALEDIILPLRAGLDDIPALPLSPDQAGALRQGRVLVGIAVDDG
QYFAMLADVPVALVEVSGREARVVRGFNL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcatggctggatcattctcgacaaaccgctggggctcggatcgacgcagggggtgagc
gcggtcaagcgcgcgctgcgcagcgggggatatgccaaggccaaggtggggcatggcggt
acgctcgacccgctggcgaccggcgtgctgccgatcgcggtgggcgaggcgaccaagctt
gcggggcggatgctcgatgcgagcaaggagtacgacttcacgatcgggttcggggtgcag
accgatacgctcgacctggaaggcaaggcggtcgctacaagcgacgtgcggccgaccatg
gcggcggtcgaggcggtgctggggcgcttcaccgggccgatcgagcaggtgccgccggcc
tattcggcgctgaaggtggggggcgagcgcgcttacgacctggcgcgggcgggcggggag
gtggtgctcgcgacgcgatcggtgacggtgcacgacctgcgtttttcccctgccacgggg
aggtggcgcgccgacggcgcgacggagggggaggatgcgcaggtgttcgcgagtccgccc
cctccgtctgccttcggcagccacctccccctggcgggggaggagattggggaggttacg
cttgccgcgcatgtgtcgaaggggacctatatccgcagcctggcgcgcgacatcgcgatc
gcgctcggcaccgtcgggcatgtgacgatgttgcggcggacgcgggcgggcccgttcggg
ctcgataccgcgatttcgctggacaaattggccgaaatggctaatgcccgcgcgcttgaa
gacatcatcctgccattgagggcggggctggacgacatcccggctctacccctctccccc
gaccaggcaggtgcgctccgacaggggcgggtgttggtcgggatcgccgttgacgatggc
caatactttgcgatgctggccgatgtgccggtagcgctggtcgaggtttcgggccgagag
gctcgtgtcgttcgcggcttcaacctctaa
DBGET
integrated database retrieval system
