Sphingomonas qomolangmaensis: NMP03_13620
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Entry
NMP03_13620 CDS
T08594
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
sqo
Sphingomonas qomolangmaensis
Pathway
sqo03030
DNA replication
sqo03430
Mismatch repair
sqo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMP03_13620 (ssb)
03430 Mismatch repair
NMP03_13620 (ssb)
03440 Homologous recombination
NMP03_13620 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sqo03032
]
NMP03_13620 (ssb)
03400 DNA repair and recombination proteins [BR:
sqo03400
]
NMP03_13620 (ssb)
03029 Mitochondrial biogenesis [BR:
sqo03029
]
NMP03_13620 (ssb)
DNA replication proteins [BR:
sqo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NMP03_13620 (ssb)
DNA repair and recombination proteins [BR:
sqo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
NMP03_13620 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
NMP03_13620 (ssb)
Mitochondrial biogenesis [BR:
sqo03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
NMP03_13620 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
Mid1
Motif
Other DBs
NCBI-ProteinID:
UUL82209
LinkDB
All DBs
Position
2852254..2852808
Genome browser
AA seq
184 aa
AA seq
DB search
MAGSVNKVIIVGNLGRDPESKSFSNGGKVVNLRIATSESWKDKNTGERKEKTEWHSVAIF
NEGLANVAERFLRKGSKVYIEGALQTRKWQDAQGQDKYSTEIVLQGFNSVLTMLDGPQGG
GAGGGGGAGGGSRGGGDWGGGGDEFAGQSSRGGGGGGGGRSSPPAKSNNDFGGFPDDLDD
DVPF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atggccggcagcgtcaacaaggtaatcatcgtcggcaatctgggccgcgatcccgaatcc
aaatccttctcgaacggcggcaaggtggtgaacctgcgcatcgccacgtcggagagctgg
aaggacaagaataccggcgagcgcaaggagaagaccgaatggcattcggtcgcgatcttc
aacgaagggctggccaacgtcgccgagcgtttcctgcgcaagggatcgaaagtgtatatc
gaaggcgcgctgcagacgcgcaaatggcaggacgcgcagggccaggacaaatattcgacc
gagatcgtgctgcagggcttcaacagcgtgctgacgatgctcgacgggccgcaaggcggt
ggtgccggcggcggtggcggtgcgggcggtggcagccgcggcggcggcgactggggcggc
ggcggtgacgagttcgccggccagtcgtcgcgcggcggcggcggcggcggcggtggtcgc
tcgagcccgcctgccaagtcgaacaacgacttcggcggcttccccgacgacctggacgac
gacgtgccgttctga
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integrated database retrieval system
