Sphingomonas qomolangmaensis: NMP03_15940
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Entry
NMP03_15940 CDS
T08594
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sqo
Sphingomonas qomolangmaensis
Pathway
sqo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sqo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMP03_15940 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sqo03019
]
NMP03_15940 (groL)
03110 Chaperones and folding catalysts [BR:
sqo03110
]
NMP03_15940 (groL)
03029 Mitochondrial biogenesis [BR:
sqo03029
]
NMP03_15940 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sqo04147
]
NMP03_15940 (groL)
Enzymes [BR:
sqo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NMP03_15940 (groL)
Messenger RNA biogenesis [BR:
sqo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NMP03_15940 (groL)
Chaperones and folding catalysts [BR:
sqo03110
]
Heat shock proteins
HSP60 / Chaperonin
NMP03_15940 (groL)
Mitochondrial biogenesis [BR:
sqo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NMP03_15940 (groL)
Exosome [BR:
sqo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NMP03_15940 (groL)
Exosomal proteins of other body fluids (saliva and urine)
NMP03_15940 (groL)
Exosomal proteins of breast cancer cells
NMP03_15940 (groL)
Exosomal proteins of colorectal cancer cells
NMP03_15940 (groL)
Exosomal proteins of bladder cancer cells
NMP03_15940 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UUL82636
LinkDB
All DBs
Position
complement(3381494..3383137)
Genome browser
AA seq
547 aa
AA seq
DB search
MASKDVKFGRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI
ELKDKFENMGAQMVREVASKTNDIAGDGTTTATVLAQAIVREGMKSVAAGMNPMDLKRGV
DLAVTKVVADLQSRSKPVSGSAEIAQVGIISANGDREVGEKIAEAMEKVGKEGVITVEEA
KGLEFELDVVEGMQFDRGYLSPYFITNPEKMSVELNDPYILIHEKKLSNLQAMLPILEAV
VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAVLTKGEV
VSEDLGIKLETVTLGMLGTAKRVTIDKDNTVIVDGAGEADAIKGRTDAIRQQIEVTTSDY
DREKLQERLAKLAGGVAVIKVGGASEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL
YATKALEGVTGANEDQTRGVDIVRKALTSLVRQIAANAGHDGAVVSGKLLDQTDTSFGFN
AATDTYENLVSAGVIDPTKVVRTALQNAASVAGLLITTEAAVSEMPDDKPAMPMGGGGMG
GMGGMDF
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaggacgtaaaattcggccgcgacgcgcgtgagcgcattctccgcggcgtc
gacatcctggccgacgcggtcaaggtaacgctggggccaaagggccgcaacgtcgtgatc
gacaagtcgttcggcgcgccgcggatcaccaaggacggcgtcaccgtcgccaaggaaatc
gaacttaaggacaagttcgagaacatgggcgcgcagatggtccgcgaagtcgcttcgaag
accaacgacatcgccggcgacggcaccaccaccgctaccgtgcttgcccaggcgatcgtt
cgcgaaggcatgaagtcggttgccgccggcatgaacccgatggacctgaagcgcggggtc
gatctggccgtcaccaaggtggtcgccgatctgcagtcgcgttcgaagcccgtctcgggt
tcggccgaaatcgcccaggtcgggattatctcggcaaacggcgaccgtgaagtcggcgag
aagatcgccgaagccatggaaaaggtcggcaaggaaggcgtgatcaccgtcgaggaagca
aagggtctcgaattcgagctcgatgtcgtcgagggcatgcagttcgaccgcggctacctg
tcgccctacttcatcacgaaccccgagaagatgtcggtcgagctgaacgatccgtacatt
ctgatccatgagaagaagctgtcgaacctgcaggcgatgctcccgatcctggaagcagtc
gtccagtcgggtcgtccgctgctgatcatcgccgaggacatcgaaggcgaagcactggcg
accctggtcgtcaacaagctgcgcggcggcctgaaggtcgcagcggtcaaggcacctggc
ttcggcgatcgtcgcaaggcgatgctcgaggacatcgcggtcctgaccaagggcgaagtc
gtttcggaagatctcggtatcaagctcgagaccgtgacgctcggcatgctcggcaccgcc
aagcgagtcacgatcgacaaggacaacaccgtcatcgtcgatggcgcgggtgaagccgat
gcgatcaagggccgcaccgatgcgatccgtcagcagatcgaggtcacgacctcggactat
gaccgtgagaagctgcaggagcgtctggccaagctggccggaggcgttgcagtcatcaag
gtcggcggcgcttcggaagtcgaagtcaaggagcgcaaggaccgcgtcgacgacgcgctg
cacgcaacccgcgcagccgtcgaagagggcatcgtccccggtggcggcaccgcgctcctc
tatgccaccaaggcacttgagggcgtgaccggcgcgaacgaggaccagacccgcggcgtg
gacatcgtccgcaaggcactgacctcgctggttcgccagatcgcggcgaatgccggccat
gacggtgcggtcgtttcgggcaagctgcttgatcagaccgacacgtcgttcggcttcaac
gcggcgaccgacacctacgagaacctggtatccgccggcgtgatcgatcctaccaaggtc
gtccgcaccgcgctgcagaacgcagcatcggtcgccgggctgctgatcaccaccgaagca
gcggtgagcgagatgcctgacgacaagcctgcaatgcccatgggcggcggcggcatgggc
ggcatgggcggcatggacttctga
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integrated database retrieval system
