KEGG   Serratia quinivorans: E4343_01015
Entry
E4343_01015       CDS       T05941                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
squ  Serratia quinivorans
Pathway
squ03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:squ00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    E4343_01015 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:squ02044]
    E4343_01015 (tssM)
Secretion system [BR:squ02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   E4343_01015 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF6384 DUF6989
Other DBs
NCBI-ProteinID: QBX64838
LinkDB
Position
complement(219152..222790)
AA seq 1212 aa
MLSTLFSIITSRLLWGFAGITALAFIIWMIGPLVAIGDYRPLEPALNRQLTIGAIYLIWF
LCRIIPRIYSAWFNRRLLSNLRAAEEVPAENGKPVAKQDEQLAQRFDEAAQLLKKARFAP
GQGDSKHRWMTHFSSQYLYQLPWYVIIGAPGAGKTTALVNSGLHFPLADRFGKSALRGVG
GTRNCDWWFTNDAVLLDTAGRYTTQESQREEDADEWKSFVGLLKKYRTRQPINGVMVTIS
IADLLSESSEARAAQASSLRKRLIELHEQLGIHFPVYVLVTKTDLLNGFMAYFNGFDKAQ
REQIWGFTFPYEASRQPDFNLNATFEQQYALLQQRLDAALPETLLVEHDGRQRAESYLFP
QEFAALRPLLGQYLEQVFATSSFETRFTPRGIYFTSGTQEGLPFDRVMGELNRYLQLPTA
NSQPHANPAWNHVDPAAPIPAGKGQSFFLKDTLESVIFQESGLAGSNRWWEYRNRAVHWA
GYILLAACLAILAIFWFTSYSNNKAYLAEVAAKVPGVERQGLGLTQLGNGDMLSLLPFLN
SVLHLPDSQNFSLEDPPFTYRMGLYRGDQVSDASDSLYQKALKELLLPQVAQQIATTLRN
DNHGDADFSYEALKAYQMLYLPKQYDGKFLRAWVMLNLQRNLPQGSTQKQLQQIEWHLSQ
LLDEQIQASPYAKDEPMVEQAQAALNRAPLSQRVYGRLKRLLLKQTEIKPVSLVDLAGPQ
TELAFSRKSGKPVTDGVPGLFTSRGYWKTFNDNIDPVTDTLRQEDVWVLNSKTPDQKNAD
LIKTIRQLYMQDFISVWDELLGDIQLANIGNLSQRISSARLLSGNPSPMRNLLVNVSKNV
TLRDEKNTADSRSLLDKTEDRLSQSANHQLEALFTHRPANADGDVSAQPEQLVMAHFAAL
LELAQSQGEGNKAIPFDSVLKQVDELYSYLTAVQGAANSGMSAPPSDIIPRLQAESGRLP
VPFKQMLLSLAIGASSDTQRKEMENVKKRISVEVGSFCRQAIAGRYPLVARARQEVTPDD
LARMFAPNSGLMDSFFRDNLQGKVDTTRANWRFTPGVDGKTLPGGEGILRSFQQAQRIRD
AFFANGTATPSYRVTVRPVRMDNDILNLTLDIDGQLFKYSHGPQVPLVISWPGTRNTNQV
HLQLALANGSTASLVTSGPWALNRLVDMAQTSAGSSSLGRQATFNLDGHRVTLEFTPNSI
RNPFQLPAFSCP
NT seq 3639 nt   +upstreamnt  +downstreamnt
atgctcagtacgttattctccatcatcaccagccgcctgttatggggctttgccggcatt
actgcgctggcgttcatcatctggatgatcggcccgttggtggctatcggcgattatcgg
ccgctggagccggcactcaaccgccagttaaccatcggcgctatctatctgatctggttt
ctgtgccgcattattccacgcatctacagtgcctggttcaaccgccgcctgctgagtaac
ctgcgtgccgccgaagaagtcccggctgaaaacggcaagccggtagccaaacaggatgag
cagttggcccagcgctttgatgaagcggcgcaattgttgaagaaagcccgcttcgcaccg
ggtcagggggacagcaaacaccgctggatgacccacttcagcagccaatatctctaccag
ctgccgtggtatgtgatcatcggtgcgccgggtgccggtaaaaccaccgcgctggtcaac
tccggcctgcattttccgctggcggatcgcttcggcaagtctgccctgcgcggtgtgggc
ggtacccgtaactgcgactggtggttcaccaatgacgccgtactgcttgacaccgcgggt
cgttataccactcaggaaagccagcgcgaggaagacgccgacgagtggaaaagcttcgtc
ggcctgctgaaaaaataccgtacccgtcagccgatcaacggcgtgatggtgaccatcagc
atcgccgatttgttgagcgaaagtagcgaagcccgcgccgcgcaggccagctcgctgcgt
aaacgcctgattgagctgcatgaacagttggggatccatttcccggtttatgtgttggtc
accaagaccgacctgcttaatggctttatggcctatttcaacggctttgataaagcgcag
cgcgagcaaatctgggggttcaccttcccctatgaggcatcgcgtcagccagatttcaat
ctgaatgccaccttcgaacaacagtatgctttgctgcagcagcgactggatgccgcgctg
cctgagaccttgttggttgaacatgatggccgccagcgggctgaaagctacctgttcccg
caggaattcgcggccctgcgtccgctgctgggccagtatctggaacaggtgtttgccacc
tccagttttgaaacccgcttcaccccgcgcggtatttacttcaccagcggcacccaggaa
ggtctgccgttcgatcgggtgatgggcgaactgaaccgttacctgcaattgccaacggcg
aacagccaaccacacgccaacccggcctggaaccatgtggatccggccgcacccatcccg
gctggcaagggccaaagcttcttcctgaaagacacgctggaatcggtgatcttccaggag
tccgggttggcgggcagcaaccgctggtgggaataccgtaaccgcgctgtgcattgggcg
ggctatatcctgctggcggcctgcctggcgatcctggcgattttctggttcaccagctac
agcaacaacaaggcttatctggctgaagtggccgccaaggtacccggcgtagaacgccag
ggactgggtctgacgcagttgggcaatggcgatatgctttcgctgctgccgttcctcaac
agcgtgctgcatttgccggacagtcagaatttctcgctggaagatcccccgttcacctat
cgcatggggctgtaccgtggcgatcaggtcagtgatgccagcgactcgctgtatcagaaa
gcgctaaaggagttgctgctgccacaggtggcacagcagatcgccacgacgctgcgcaac
gacaaccacggcgatgccgattttagctacgaagcactgaaggcctaccagatgctgtat
ctgccgaaacagtatgacggcaaattcctgcgcgcctgggtcatgctcaacctgcaacgc
aacctgccgcagggcagcacccagaagcagctgcagcagattgaatggcatctgagccaa
ttgctcgacgagcagatccaggcttcgccttacgccaaagatgaacctatggtggaacag
gcccaggccgcgctaaaccgtgctcccctgtcgcagcgggtgtacggccgcctgaaacgc
ctgctgcttaagcaaaccgagattaaaccggtcagcctggttgacctggccggcccgcag
accgaactggccttttcgcgcaaaagcggcaagccggtgaccgacggggtgccgggcctg
tttacctcacggggctattggaaaaccttcaacgacaatattgatccggtgaccgatacc
ctgcgtcaggaagatgtttgggtactgaacagcaaaaccccggatcagaaaaacgccgat
ttgatcaaaaccattcgccaactgtacatgcaggactttatcagcgtctgggatgaactg
ctgggtgatattcagttggccaatatcggaaacctgagtcagcgcatcagcagcgcacgc
ttgttgtcaggcaacccttcgccgatgcgtaacctgctggttaacgtcagcaagaatgtc
accctgcgcgacgagaaaaacactgctgactcccgttcgctgctggataaaaccgaagac
cggctgagccagagtgccaaccaccaactggaagccctgttcacccatcgaccggccaac
gccgacggcgatgtctctgcccagccggaacaactggtgatggcgcatttcgccgcatta
ctggagctggcgcaaagtcagggagaaggcaacaaggcgatcccgttcgacagcgtgctg
aaacaggttgatgagttgtacagctacctgaccgcggttcagggcgcggccaacagcggc
atgtcggcaccgcccagcgatatcatcccgcgcttgcaggccgagtccggtcgtttaccg
gtgccgttcaaacagatgctgctgtcgctggcgattggtgccagcagcgacacgcaacgc
aaagagatggaaaacgtcaagaaacgcatcagcgttgaagtcggcagcttctgccgccag
gcgattgccgggcgttatcccctggtcgcccgggcgcgtcaggaagtgacgccagacgat
ttggcgcgcatgtttgcgccgaacagcgggctgatggacagtttcttccgtgacaatttg
cagggcaaggtcgacaccacccgtgccaactggcgtttcactcccggcgtagacggcaaa
acgctgcccggtggcgaaggcatcctgcgttcatttcagcaggcgcaacgcattcgtgac
gccttctttgccaacggcaccgccacgccgtcttaccgcgtgaccgttcgaccggtgcgg
atggataacgacatcctcaacctgacgctggatatcgacgggcaactgttcaaatacagc
cacgggccacaggttcctctggtgatcagttggccgggtacccgcaataccaatcaggtg
cacctgcagctggcgctggccaacggctccaccgccagcctggtcaccagcggcccctgg
gcgctaaatcgtttggtggatatggcgcagacttccgccggcagcagcagcctcggtcgt
caggccacctttaacctggatggccaccgcgtaacgctggagttcacccccaacagtatc
cgcaatccgttccagttaccggcattctcctgcccgtag

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