Serratia quinivorans: E4343_02035
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Entry
E4343_02035 CDS
T05941
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
squ
Serratia quinivorans
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
squ03009
]
E4343_02035 (dbpA)
Enzymes [BR:
squ01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
E4343_02035 (dbpA)
Ribosome biogenesis [BR:
squ03009
]
Prokaryotic type
rRNA helicases
E4343_02035 (dbpA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QBX65029
LinkDB
All DBs
Position
439641..441023
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AA seq
460 aa
AA seq
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MSTVSFSSLPLPAEQLANLNELGYAEMTPVQAAALPAILNGQDVRAKAKTGSGKTAAFGI
GLLDKINVAQVAAQALILCPTRELADQVSKELRRLARFTQNIKILTLCGGQPMGPQLDSL
VHAPHIVVGTPGRIQEHLRKKTLVLDELKVLVLDEADRMLDMGFADDIDDVISYTPPQRQ
TLLFSATYPSGIERISARVQRSPLNVEVDDGEEQTTIEQRFYETTRDQRPAVLVSAIRHY
QPSSCVVFCNTKRDCQSVYEALESRGINVLALHGDLEQRDRDQVLVRFANRSCRVLVATD
VAARGLDIKELELVVNYELAFDPEVHVHRIGRTGRAGLSGKAISLCTPQEMTRAHAIEDY
LQTKVKWAPVSELSGAGNTTLEAEMVTLCIDGGRKAKIRPGDILGALTGDAGLTAAEVGK
IDMFPVHAYVAIRKESARKALQQLQQGKIKGKNCKVRLLK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacagtatctttttcttccctgccgctgccagccgaacagttggccaacctcaac
gaactggggtatgccgaaatgacaccggtgcaggccgccgcactgcccgccatcctgaat
gggcaggacgtacgtgccaaagcaaaaaccggcagcggtaaaacggcggcgttcggcatc
ggtctgctggacaaaattaacgtagctcaggtggccgcgcaggcgctgatcctgtgcccg
acgcgtgagctggctgaccaggtgagcaaagaattgcgccgtttggcgcgcttcacccag
aacattaaaattttgaccctgtgcggcggtcagccgatggggccacagcttgactcgctg
gtacatgccccccatatcgtggtggggacgccggggcgcattcaggaacacctgcgcaag
aaaacgctggtactggatgaactgaaagtgctggtgctggacgaagctgaccgcatgttg
gacatggggttcgccgatgacatcgatgacgtgatcagttacacgccgccgcagcgccaa
acgctgctgttctcggcaacctatccgagcggtatcgaacgcatcagcgcccgcgtgcag
cgcagcccgttaaatgtggaagtggacgacggtgaagaacaaaccaccatcgaacaacgc
ttctatgaaaccacccgcgatcagcgtccggcggtgctggtgtcggcaatccgccattac
caaccttcttcctgcgtggtgttctgcaacaccaagcgcgactgtcaaagcgtgtatgaa
gcgctggagtctcgcggcatcaacgtgctggctctgcatggcgatctggaacagcgcgat
cgtgaccaggtgctggtgcgttttgccaaccgcagttgccgggtgctggtggcaactgac
gttgccgcgcgcggcctggatatcaaagagctggagctggtagttaactacgagctggca
tttgatccggaagtgcacgttcaccgcattggccgtaccggccgtgccggtttgagcggc
aaggcgatcagcctgtgcacaccgcaggaaatgacgcgtgcacatgccattgaagactat
ttgcaaaccaaggttaagtgggcgccggtatctgagctgagcggggcggggaataccacg
ctggaagccgaaatggtcaccctgtgcatcgacggtggtcgcaaggccaaaatccgtcca
ggcgacattctcggcgcattgaccggcgatgccgggctgacggcggcggaagtgggcaag
atcgacatgttcccggtacatgcctatgtggcgatccgcaaggaaagcgcccgcaaggca
ctgcaacagcttcagcagggcaaaatcaagggtaagaactgcaaggtgcggttgttgaaa
taa
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