Serratia quinivorans: E4343_02565
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Entry
E4343_02565 CDS
T05941
Name
(GenBank) DNA-binding transcriptional regulator H-NS
KO
K03746
DNA-binding protein H-NS
Organism
squ
Serratia quinivorans
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
squ03036
]
E4343_02565
03400 DNA repair and recombination proteins [BR:
squ03400
]
E4343_02565
Chromosome and associated proteins [BR:
squ03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
E4343_02565
DNA repair and recombination proteins [BR:
squ03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
E4343_02565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF6626
DUF3037
PaaX_C
Swi5
DUF6280
TetR_C_24
Motif
Other DBs
NCBI-ProteinID:
QBX65127
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All DBs
Position
complement(542595..543002)
Genome browser
AA seq
135 aa
AA seq
DB search
MSEALKILNNIRTLRAQARECSLETLEEMLEKLEVVVNERREEDSQAQAEVEERTRKLQQ
YREMLIADGIDPNELLQTMAATKAAGKAKRAARPAKYQYKDENGELKTWTGQGRTPAVIK
KAIEEQGKSLDDFLL
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcattaaagattttgaacaacatccgtactctacgcgcacaggcaagagaa
tgcagcctggaaacgctggaagaaatgcttgaaaaactggaagttgttgtgaacgaacgt
cgcgaagaagacagccaggctcaagcagaagttgaagaacgcacccgtaaactgcagcaa
tatcgtgaaatgctgattgctgacggtattgatcctaatgaactgctgcaaactatggct
gcaactaaagccgctggtaaagctaaacgtgcagcacgtccggccaaataccaatataaa
gacgaaaacggcgaactgaaaacctggactggccagggccgtaccccagcagtgattaag
aaagctatcgaagagcaaggtaaatctctggacgatttcctgctgtaa
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