Serratia quinivorans: E4343_07615
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Entry
E4343_07615 CDS
T05941
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase accessory protein YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
squ
Serratia quinivorans
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
squ03009
]
E4343_07615
Ribosome biogenesis [BR:
squ03009
]
Prokaryotic type
ribosomal protein modification factors
E4343_07615
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
YcaO_C
Motif
Other DBs
NCBI-ProteinID:
QBX66058
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Position
1646226..1647989
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AA seq
587 aa
AA seq
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MTQTFIPGKDAALEDSIARFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGKQIAEGDFVHYPNEKWFPIPADDSLPAG
ILDERLHAFYNPDQDVNASDLIDLQSGNGDRGICALPFSRQSDQQTVYIPMNIIGNLYVS
NGMSAGNTANEARVQGLSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAIAKLEEE
GFPILSYDASLGGNYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTAPTFDDEEVAEHTNLETHFIDSSGLISWDMFKQDADYPFVDWSFSGSTQEEFATLM
SIFDKEGAEVYIADYEHLDVYACRIIVPGMSDIYPAEDLLLANNSMGAHLRDLLLALPGS
EWEPQEYLALIERFDDEGLDDFTRVRELLGIATGKDNAWNTLRVGELKSMLALAGGDMDQ
ALIWAEWTQDFNASVLSPARSNYYRCLQTLLLLTQEPERDPAQYYAAFVKMYGQEAVDAA
SAAISGEERFNGLFAVDSSLKALPAHQALLAAYEKLQNAKRRYWAQA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacttttatccctggcaaagatgccgcgctggaagactctatcgcccgtttc
caacagaaattaagcgatctgggttttaatatcgaagaggcctcctggctgaacccggtg
ccgcacgtatggtcggttcacatccgcgatcgcgattgcccgctgtgcttcaccaacggt
aaaggcgccagcaagaaagctgcgctggcttccgctttgggcgaatacttcgaacgcctt
tctaccaactatttctttgccgacttctatctgggcaagcagattgccgaaggcgatttc
gtgcattacccgaacgagaaatggttcccgatcccggccgatgattcgctgccggccggt
attctcgatgaacgtctgcatgcattctacaatccggatcaggatgttaacgccagcgat
ctgatcgatctgcagtccggtaatggcgatcgtggcatttgcgccctgccgttttcccgt
cagtcagaccagcagacggtttatatcccgatgaacatcatcggtaacctttatgtgtcc
aatggcatgtctgccggcaacaccgccaacgaagctcgcgtgcagggcttgtctgaggtg
ttcgagcgctatgtgaaaaaccgcatcatcgccgaatccatcagcctgccggagatcccg
gcggaagtattgaaccgctatccgggcgtggtggaagccatcgccaagctggaagaagaa
ggtttccctatcctgtcctacgacgcctcactgggcggcaattatccggtgatctgcgtt
gttctgttcaacccggctaacggcacctgtttcgcctcgtttggtgcccaccctgatttt
ggcgtggcgcttgagcgtaccgtcactgaactgctgcagggccgcagtctgaaggatctg
gacgtgttcaccgcgccaaccttcgacgacgaagaagtggcggagcacaccaacctggaa
acccactttatcgattccagcggtttgatctcctgggatatgttcaagcaggatgcggat
tacccgtttgtcgactggagcttcagcggcagcacgcaggaagagttcgccacgttgatg
agcatcttcgataaagaaggcgcggaagtgtacatcgccgactacgagcatctggacgtg
tacgcctgccgtatcatagtgccgggcatgtcagacatctatcctgcggaagacctgctg
ctggctaacaacagcatgggcgcacatctgcgagatcttctactggcgctgccgggcagt
gagtgggagccacaagaatatctggcgctgattgaacgctttgacgacgaaggcctggac
gatttcacccgcgtgcgtgagctgttgggtattgccaccggtaaagacaacgcctggaat
accctgcgcgtgggcgagctgaaatcaatgctggcgctggccggcggcgatatggatcag
gcgctgatctgggccgaatggacgcaggacttcaacgcttcggtgttgagcccggcacgc
agcaactactaccgttgcctgcaaaccctgctgttgctgacgcaagagccagaacgcgat
ccggcgcagtactacgcggccttcgtgaaaatgtacggtcaggaagcggtggatgctgcc
tctgcggccatcagcggcgaagagcgctttaacggcctgttcgcggtcgatagcagtctg
aaagccttgccggctcatcaggctctgttagcggcctacgaaaaactgcagaacgccaag
cgccgttattgggcacaggcataa
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