Serratia quinivorans: E4343_08770
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Entry
E4343_08770 CDS
T05941
Symbol
ybiO
Name
(GenBank) mechanosensitive channel protein
KO
K22044
moderate conductance mechanosensitive channel
Organism
squ
Serratia quinivorans
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
squ02000
]
E4343_08770 (ybiO)
Transporters [BR:
squ02000
]
Other transporters
Pores ion channels [TC:
1
]
E4343_08770 (ybiO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_TM1
MS_channel_2nd
MS_channel_1st
MS_channel_3rd
DUF5670
DUF3262
Motif
Other DBs
NCBI-ProteinID:
QBX66277
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Position
1904383..1906596
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AA seq
737 aa
AA seq
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MPATAYSRLGSHLRERWFPLLLLLIACTVSPLAMAQSAQKTAPVDQSQQQKASYAALADI
LQDDKARAALIGHLRQAADQSANGPPKTEASETPESLSDNLSNLAQGGISSVNQRLNSLQ
KLIDSGPKRSFNPDSFFRALGYFLLTVAVTFAIFHLIRRLIHPLYKRMGSWGHNAKLQQG
PWYKLPTAILGAFAVDLLVLLLALAAGNLFARHVNADSATILRLQTLFLSAFAVIEFFKA
ILRLIFSPNFDYLRPFPFSDASAHYWNQRLAWLSGLIGYGLMVVVPVVATQISYPAAAAA
NLIIMLALTLYAVALILRNRKPIQRQINLLAERSMAFFSIILRGLGHVWHLLAIAYFLVL
FALSQFDIGNSLRFMMTATVKSLVVVGLGALLSGMLTRWIFRRISLPEDVNRRYPMLERR
INSYIPNGLKILRVIVVLAVTLLLFDAWHLINLYQWAGSENGEKIIGGLVHILLIVVIAV
FSWTLMASIIEHRLALELSNGIRPSARERTLLTLFRNVLAIVISTITIMIVLSQVGINIA
PLLAGAGALGLAISFGAQTLVKDVITGVFIQFENGMNTGEYVTVSGITGTVERMTIRSIG
LRDDYGVYHIVPFSSITTLANYAREFGVYRANYSVSRDEDIDHVHEVLHQAVDALKQDDQ
VKHFLVGEPVFNGVVALGDRSFTTRVTVRTQALKQWVVQYALDRLVKMHFDQADIAMPQQ
AMQLSYAPNAGTPPETS
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcaaccgcatactcccgattaggttctcatctgcgagaacgctggtttcccctg
ttactgctgctgatagcctgcacagtttccccattggcgatggcgcaatccgcgcagaaa
accgcccccgttgaccaaagccaacagcaaaaagcctcttacgccgcactggcggatatt
ctgcaagacgataaggcccgcgccgcgctgatcggccacctcagacaggcagcagatcaa
tctgccaacggcccgccgaaaacagaagcgtcagaaacgccagagtcgctgagcgacaat
ctgagcaatctggcacaagggggcatcagcagcgttaaccaaaggctgaactcgctgcaa
aagctgatcgactcggggccaaaacgcagttttaatcccgacagttttttccgcgccctg
ggctactttctgctgacggtcgcggtgaccttcgccatcttccatctgatccgtcggctg
atccacccgctgtacaaacgcatgggcagttggggacacaacgccaaattgcagcagggg
ccgtggtataaattgccgacggccatcctcggcgctttcgccgtcgatctgctggtattg
ctactggcgctggcggcgggcaacctgtttgcgcgccatgttaatgccgacagcgcgacc
atcctgcgtttgcaaaccctgtttcttagcgcctttgcggttatcgaattcttcaaggcg
atactgcggttgattttctcgcccaacttcgattatctgcgccccttcccgtttagcgat
gccagcgcccactactggaaccagcgtctcgcctggctgagcggcctgattggctacggt
ctgatggtggtggtgccggtagtggcgacgcaaatcagctatccggctgcggcggccgcc
aatctgattatcatgctggccctgacgctgtatgcggtggcactgatcctgcgtaaccgc
aaaccgatacaacggcaaatcaacctgctggccgagcgatccatggcatttttcagcatt
attttgcgcggtctgggccacgtctggcacctgctggcgatcgcctatttcctggtgtta
tttgcactgtcgcagtttgatattggcaacagcctgcgctttatgatgaccgcgacggtg
aaaagcctggtagttgttggcctcggcgccctgctttccggcatgctgacccgttggatt
ttccgacgaatctcactgccggaagacgtcaatcggcgctacccaatgctggaacgacgc
attaactcctatattcccaatgggttgaaaatactgcgggtgatagtggtgttggcggtg
acgctgcttctgtttgacgcctggcatctgatcaatttgtaccagtgggccggcagcgaa
aacggcgagaaaatcattggtgggctggtgcatatcctgctgattgtggtgattgccgtg
ttcagctggacgctgatggccagcattatcgaacaccgcctggcattggaactgagcaac
ggtattcgcccgagcgcgcgtgaacgtaccttattgacgctgtttcgcaacgtactggcg
atagtgatcagcaccattaccatcatgattgtgctgtcacaggtggggattaacattgcg
cccctgctggccggtgccggagcactggggctggctatcagctttggggcgcaaacgctg
gtgaaagatgtgattaccggcgtattcatccaattcgaaaacggcatgaataccggcgaa
tatgtcaccgtcagcggtattaccggcacggtggagcgcatgaccatccgttcaatcggt
ctgcgggacgactacggcgtgtatcacatcgttcccttttcttcgatcaccacgctggcc
aactatgcccgcgaatttggcgtctaccgagccaattacagcgttagccgcgacgaagac
atcgatcatgtccatgaagtgctgcatcaggccgttgatgcattgaaacaagacgatcag
gtgaaacattttctggtcggcgaaccggtattcaacggtgtggtcgcgctgggtgaccgt
tccttcaccacccgggtcaccgttcgcacccaggcgttgaaacagtgggtggtgcagtac
gcgctcgatcgcctggtaaaaatgcattttgaccaggccgatatcgccatgccacaacag
gccatgcagctttcttatgctccgaacgcgggaacgccgccggaaacgtcctga
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