Serratia quinivorans: E4343_09320
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Entry
E4343_09320 CDS
T05941
Symbol
ddlA
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
squ
Serratia quinivorans
Pathway
squ00470
D-Amino acid metabolism
squ00550
Peptidoglycan biosynthesis
squ01100
Metabolic pathways
squ01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
E4343_09320 (ddlA)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E4343_09320 (ddlA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
E4343_09320 (ddlA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
squ01011
]
E4343_09320 (ddlA)
Enzymes [BR:
squ01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
E4343_09320 (ddlA)
Peptidoglycan biosynthesis and degradation proteins [BR:
squ01011
]
Precursor biosynthesis
Amino acid ligase
E4343_09320 (ddlA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATPgrasp_ST
RimK
Motif
Other DBs
NCBI-ProteinID:
QBX66380
LinkDB
All DBs
Position
complement(2022587..2023690)
Genome browser
AA seq
367 aa
AA seq
DB search
MSKLRVGVIFGGKSAEHEVSLQSAKNIVDAIDKEKFDVTLLGIDKQGQWHINDASNYLLN
AENPALIALNRSNKNVALIPGQEKQQLIESGSQGALGQLDVIFPIVHGTLGEDGSLQGLL
RMANLPFVGAGVLGSAVSMDKDVTKRLLRDAGLAIAPFVTLTRSNRAKFDFEQLSERLGL
PLFVKPANQGSSVGVSKVQDRAGFEAAVALAFSFDHKVLVESAIVGREIECAVLGNDEPQ
ASLCGEIVLSDAFYSYDTKYINEQGAQVIVPAAIEPEVSDKIRDVALKAFRALECFGLAR
VDVFLTPDNNVVINEINTLPGFTNISMYPKLWAASGVSYSQLITRLIELAMERHQQDRAL
NSSVFDR
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaattacgtgttggggtgatctttggcggtaaatcggcggagcatgaagtttcg
ctgcagtcggcaaaaaatattgtggatgcaatcgacaaagagaagtttgacgtcacgctg
ctggggatcgacaagcaggggcaatggcacattaacgatgcgtccaattacctgctgaat
gcggaaaacccggcgctgatcgcgctgaaccgctcaaataaaaatgtggcgctgatcccc
ggtcaggagaaacagcagctgatcgagtcgggcagccagggcgcactgggccagttggat
gtgatattcccgatcgtacacggcacattgggtgaggacggttcgctgcaggggctgttg
cgaatggctaatctgccgttcgtcggtgccggcgtgttgggttcggcggtcagcatggat
aaagacgtgaccaaacgcctgctgcgtgatgccgggctggcgatagcgccgtttgtgacg
ctgacccgcagcaatcgcgccaaattcgattttgagcagcttagcgaacgtctggggctg
ccgctgtttgttaaaccggccaaccagggctcttcggtaggcgtcagcaaggtacaggac
cgcgccggttttgaggctgcggtggcgctggcgttcagcttcgatcataaggtgctggtg
gagtcggcgattgtcggccgtgagattgaatgcgcggtattgggcaacgacgaaccccag
gccagcctgtgtggcgaaatcgtgctgagtgacgccttctattcctacgacaccaaatac
atcaatgagcagggcgctcaggtgatagtgccggcggcgattgagccggaggtgagcgat
aaaatccgtgacgtggcgctaaaagcctttcgggcgctggagtgtttcgggctggcgcgc
gtcgatgtatttctgacgccggacaacaacgtggtgatcaacgaaatcaacacgctgcca
ggctttaccaatatcagcatgtatcccaaactgtgggccgccagcggtgtcagctacagc
caattgatcactcgcctgattgagctggcgatggaacgccatcagcaggatcgcgctttg
aacagctcggtgtttgaccggtaa
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