KEGG   Serratia quinivorans: E4343_09645
Entry
E4343_09645       CDS       T05941                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
squ  Serratia quinivorans
Pathway
squ03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:squ00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    E4343_09645 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:squ03400]
    E4343_09645 (uvrB)
DNA repair and recombination proteins [BR:squ03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     E4343_09645 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      E4343_09645 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_30 SBDS_domain_II DUF87 AAA_22 Tea_C zf-C4H2
Other DBs
NCBI-ProteinID: QBX66440
LinkDB
Position
complement(2083007..2085019)
AA seq 670 aa
MSKVFKLHSEFKPAGDQPQAISKLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDAAVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQ
YARNDQAFQRATFRVRGEVIDVFPAESDELALRIELFDEEVERLSLFDPLTGQIEQVVQR
FTIYPKSHYVTPRERILQAMEEIKVDLAERRKVLLANNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRKEGEPPPTLFDYLPADGLLVVDESHVTIPQIGAMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGKYELEKSGDDIIDQVVRPTGLLD
PLIEVRPVTTQVDDLLSEIRKRVAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDRITDSMARAISETERRRAKQQAFNEENGIVPQGLNKKVSDVLQLG
KPGNRGKGRGKGKAAENVGQYKNLTPKALDQKIRELEAQMYTHAQNLEFELAAGLRDEIH
QLREQFIAIS
NT seq 2013 nt   +upstreamnt  +downstreamnt
atgagtaaagttttcaaactgcattccgaattcaaaccggccggcgatcagccgcaggcc
atcagcaagctggaagagggcctggaagacggcctggcacatcagacgctgctgggcgtt
accgggtcgggcaagacatttaccgtcgccaatgtgatagccgatctgaaccggcccacc
atggtgctggcacctaacaaaacgctggcggcgcagctgtacggtgagatgaaagagttc
tttcccgagaatgcggtcgagtattttgtctcttactacgactactaccaaccggaagcc
tacgtacccagctccgacacctttatcgaaaaagacgctgcggtgaacgaacacatcgag
cagatgcgtctttccgcgaccaaagcattgctggagcgccgcgatgtgatcgtggtggcg
tcggtctcggcgatctacggtctgggcgatcctgatctgtatctgaagatgatgctgcac
ctgaccaagggcatgatcatcgatcagcgttcgatcctgcgtcgtttggcggagctgcaa
tatgcccgtaacgatcaggccttccagcgcgcgaccttccgcgtgcgtggcgaggtgatc
gacgtcttcccggcagagtcggacgagttggcgctgcgcattgaactgtttgatgaggag
gtcgagcggctttcgctgtttgatcctttgaccggccagatcgaacaggtggtccagcgt
tttaccatttatccgaagtcgcactacgtgacgccgcgtgagcggatcctgcaggcgatg
gaagagatcaaagtggatctggccgaacggcgcaaggtgctgttggccaataacaagctg
ctggaagaacagcgcctgacgcagcgcacccagtttgatctggagatgatgaacgaactg
ggttactgctccggcattgaaaactattcgcgctacctgtccggacgtaaagagggcgag
ccaccgccgacgctgtttgattatttaccggcggatggcctgctggtggtcgatgaatcc
cacgtcaccattccgcaaatcggcgctatgtacaagggcgaccgttcgcgcaaagagacg
ctggtggaatacggtttccgtctgccgtcggcgctggacaaccgcccgatgcgttttgaa
gagttcgaagcgctggccccacagacgatctacgtgtctgccacgccgggcaaatatgag
ctggagaagtccggagacgatattatcgatcaggtggtgcgccctaccggcttgctggat
ccactaatagaagtcaggccggtgaccacccaggtggatgacctgctgtctgaaattcgc
aagcgggtggcaatcaacgagcgcgtactggtcaccaccctgaccaaacgcatggcggaa
gacctgaccgaatatctcgaagagcacggcgagcgggtacgctatctgcactcggacatc
gataccgtggaaagggtcgaaatcattcgtgacctgcgcctgggtgagtttgacgtgctg
gtgggtatcaacctgttgcgtgaggggctggacatgcctgaggtgtcgctggtggcgatt
ctggacgcagataaagaaggcttcctgcgttccgaacgttcgctaatccagaccattggt
cgtgcggcgcgtaacctcaatggtaaagcgatcctctacggtgacagaattaccgactcg
atggccagggcgataagcgagaccgaacgtcgtcgcgccaaacagcaggcgttcaacgaa
gaaaatggcatcgtgccgcagggcctgaacaagaaagtttccgatgtattgcagctgggc
aaaccgggcaatcgcggcaagggccgagggaagggcaaggcggcggaaaacgttgggcaa
tacaaaaatctcacgccaaaagccctggatcaaaaaatccgcgagctggaagcgcagatg
tatacccacgcacagaatctggagttcgagttggcggcaggcttgcgtgatgagatccac
cagctgcgcgagcagtttatcgctatttcgtga

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