Serratia quinivorans: E4343_10000
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Entry
E4343_10000 CDS
T05941
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
squ
Serratia quinivorans
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
squ03400
]
E4343_10000 (phrB)
Enzymes [BR:
squ01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
E4343_10000 (phrB)
DNA repair and recombination proteins [BR:
squ03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
E4343_10000 (phrB)
Prokaryotic type
E4343_10000 (phrB)
BRITE hierarchy
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GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DPRP
Motif
Other DBs
NCBI-ProteinID:
QBX66501
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All DBs
Position
complement(2153189..2154619)
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AA seq
476 aa
AA seq
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MTTHLVWLRNDLRITDNKALHAACSDPDARVLAVFIATPQQWRQHEMAPRQAAFIHANLL
QVQQALAERGIPLGYHQCDDFAAAVDWLTAYCAQQQVDRLFYNRQYEINERQRDQRLEQR
LSGQAICQSFDDSLLLPPGSVQTGSGEMYKIYTPFRKAFIQRLTESDIQSLPAPKPRAGG
ALPVTAIPEAFDYPPAEPNEDFPAGEEAALQRLRSFCREQVQDYLEQRDLPAIAGTSSLS
PYLAIGVLSPRQCFNRLRAECPQLLENHDSGAFGWLNELIWREFYRHLMVAYPALCKHRP
FIEWTDRVRWQDNQERLQAWQQGATGYPIVDAAMRQLNTTGWMHNRLRMISASFLVKDLL
IDWRAGESYFMSQLLDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDPQGTYIR
KWLPELADVPDNAIHQPHRWAEQQQRVLDYPLPIVDHKQARLETLAAFEAAKRGEY
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgcatctggtctggttgcgtaacgatctgcgtattaccgacaacaaagcgttg
catgccgcttgcagcgatcccgacgcccgcgtgctggcggtgtttatcgccacaccgcaa
caatggcgacagcacgaaatggccccccgccaggctgcatttatccatgccaacctgttg
caggtgcagcaggctcttgccgaacgcggcattccgcttggctaccaccagtgtgatgat
tttgccgccgcggttgactggctgacggcgtattgcgcgcagcagcaggtggataggctg
ttttacaatcgccagtatgaaatcaatgagcgccagcgcgaccaacggctggaacagcgc
ttgtccgggcaggcgatttgccagagttttgatgacagcctgctgttaccgccgggtagc
gtgcagaccggtagcggcgaaatgtacaaaatctacacgccgtttcgtaaagcctttatc
cagcgtctgactgaatccgacattcaatccttgcctgcgccaaaaccacgggcaggcggc
gcattaccggtaaccgctatcccagaggcatttgattatccgccggcagagccgaacgag
gatttccccgccggggaagaagcggcgctacagcggctacgcagcttttgccgtgagcag
gtgcaggattacctcgagcagcgggatttgcccgccattgccgggaccagcagcctgtcg
ccttatctggcaattggtgtgttgtcgccgcgccaatgttttaaccgcctgcgagctgaa
tgtccgcagttgctggaaaatcatgacagcggtgccttcggctggctcaatgagctgatc
tggcgcgagttttatcggcatttgatggtggcctatcccgcgttatgcaagcaccgtccc
tttatcgaatggacggatagggtacgctggcaggataaccaagaacggttgcaggcctgg
cagcagggcgcgaccggttatccgattgtcgatgcagccatgcgccaattgaataccacc
ggctggatgcacaaccgattacgcatgatcagcgccagttttctggtgaaagacttgttg
atcgactggcgtgccggtgaaagctatttcatgtcacagctattggacggcgatctggcg
gccaataatggcggttggcagtgggcggcctcaaccggcactgacgctgcgccgtacttc
cgcatctttaacccgaccactcagggcgaacgttttgatccgcaaggcacttatatccgt
aaatggttgcccgagctggcggatgtaccggacaatgctatccatcaaccccatcgctgg
gcagaacaacagcagcgcgtgctggattatccgctgccgatcgtcgaccacaaacaggcg
cggctggagacgctggcggcctttgaagcggcgaagcgcggggaatattaa
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