Serratia quinivorans: E4343_10290
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Entry
E4343_10290 CDS
T05941
Symbol
mrdA
Name
(GenBank) peptidoglycan DD-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
squ
Serratia quinivorans
Pathway
squ00550
Peptidoglycan biosynthesis
squ01100
Metabolic pathways
squ01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E4343_10290 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E4343_10290 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
squ01011
]
E4343_10290 (mrdA)
Enzymes [BR:
squ01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E4343_10290 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
squ01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
E4343_10290 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QBX66551
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Position
2213344..2215239
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AA seq
631 aa
AA seq
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MKIERNPFRDYTAESALFVRRALVAFLVILVLTGTLIANLYNLQIVRFEDYRTRSNENRI
KLVPIAPSRGIIYDRNGTPLALNRTIYQLELMPEKVDDLKATLQALRPVVDLTDEDITNF
EKERKRSRRFVSIPVKTALNEVQVARFAVNQFRFPGVEVKGYQRRYYPYGSALTHVIGYV
SKINDRDVERLDKDGKLANYAATHDIGKLGIERYYEETLHGKTGYEEVEVNNRGRVIRQL
HEQPPSAGQDVYLTLDLNLQRYIEQLLVGSRAAVVVSDPRTGGILAMVSNPSYDPNLFVD
GISSKDYQGLLNDPNRPLINRATQGLYPPASTVKPYIAVSALSAGVITKNTSLFDPGWWQ
LPGSEKRFRDWKKWGHGRLNVTKALEESADTFFYQVAYDMGIDRLSTWLTKFGYGDYTGI
DLSEERSGLMPTRDWKFKRYKKPWYQGDTIPVGIGQGYWTATPIQMAKALTTLINDGNVK
TPHLLQSTRINGALVPFTQEESKQIGDIHSGFWEIAKDGMYGVANRPNGTARKYFSDAPY
KAAAKSGTAQVFGYETYNAHKLAEHLRDHKLMTAFAPFNNPTVSVAIILENGGSGPAVGT
ITRQILDHILLGDNNTQLPSEAPLPPGVEGD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagaacgtaacccttttcgcgactatacggctgaatccgccctgtttgtacgc
cgcgccctggtggcgttcctggtcatcctggtgctgaccggcaccctcatcgccaatctg
tataacctgcaaatcgtccgctttgaggattaccgtacccgctccaacgaaaaccgcata
aaactggtgccgatcgcgcccagccgcggcattatctacgatcgcaacggcaccccgctg
gcgctcaatcgcaccatttatcaactggagctgatgccggaaaaggtcgatgacctgaag
gccacgctacaggcactgcgtccggtggtcgatctgaccgacgaagacatcaccaacttc
gagaaagagcgcaaacgctcacgtcgcttcgtctccattccggtgaaaaccgccctgaac
gaagtccaggtggcgcgttttgcggttaaccagttccgcttccccggcgtcgaggtcaaa
ggctaccagcgtcgctactatccttatggctccgctctgacccatgtcatcggctacgta
tcgaaaatcaacgaccgcgacgtcgaacgtctggataaagacggcaaactggccaactac
gccgccacgcacgatatcggcaagctgggcatcgagcgctattacgaagaaactctgcat
ggcaaaaccggctacgaagaggttgaagtcaacaaccgcggccgggtgatccgccaactg
catgaacaacccccttccgccggtcaggacgtttacctgacgctggatctcaacctgcaa
cgctatatcgagcagttgctggtcggcagccgtgcagccgtggtagtgagcgatccgcgc
accggcggcattctggcgatggtctctaaccccagctatgatccgaacctgttcgttgat
ggtatctccagtaaagactatcaggggctgctcaacgatccgaaccggccgttgattaac
cgcgccacgcaagggctgtatccaccggcgtctacggttaaaccctacattgccgtctcg
gcgctcagtgccggggtgatcaccaaaaacaccagcctgttcgatcccggctggtggcaa
ttgcccggctcggaaaaacgcttccgcgactggaaaaaatggggccatggccgcctgaac
gtcaccaaagcgctggaagaatcagcggataccttcttctatcaggttgcctacgacatg
ggtatcgatcgtctgtcgacctggctgaccaagttcggttacggcgattataccggtatc
gatctgtccgaagaacgttccggcctgatgccgacccgcgactggaaattcaagcgctat
aaaaaaccctggtatcagggagacaccattccggtgggcatcggccagggctactggacg
gcaacgccgatccaaatggccaaggcactgaccacgctgattaacgacggcaacgtcaaa
acgccacacctgctgcagagcaccagaatcaatggtgcgctggtgcccttcacccaggaa
gagagcaagcagatcggcgatattcattcaggcttctgggaaattgccaaagatggcatg
tatggtgtagccaaccgtccgaacgggacggcgcgtaagtacttctcggatgcaccttac
aaagccgcggcgaaatcgggtaccgcacaggtattcggctacgaaacctacaacgcccac
aaactggcagaacacctgcgtgaccataaattgatgaccgcctttgctccgttcaacaat
ccaacggtatcggtcgccatcattctggaaaacggcggctccggtccggcggtcgggaca
atcacccgtcagatcctcgaccatattttgctgggcgacaacaatacgcaattaccatct
gaagccccactgccaccaggcgtagagggtgattaa
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