KEGG   Serratia quinivorans: E4343_11100
Entry
E4343_11100       CDS       T05941                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
squ  Serratia quinivorans
Pathway
squ00740  Riboflavin metabolism
squ01100  Metabolic pathways
squ01110  Biosynthesis of secondary metabolites
squ01240  Biosynthesis of cofactors
squ02024  Quorum sensing
Module
squ_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:squ00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    E4343_11100 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    E4343_11100 (ribD)
Enzymes [BR:squ01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     E4343_11100 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     E4343_11100 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam
Other DBs
NCBI-ProteinID: QBX66696
LinkDB
Position
complement(2371977..2373086)
AA seq 369 aa
MHNDEFYMARAFELARLGRFTTAPNPNVGCVIVRDGEIVGEGYHLRAGEPHAEVHALRMA
GEKARGATAYVTLEPCSHHGRTPPCADALVAAGVARVVAAMQDPNPEVAGRGLYKLQQAG
LDVRHGLMLAEAESVNLGFLKRMRTGFPYVQLKLGASLDGRTAMASGESQWITSPQARQD
VQRLRAQSAAILSTSATVLADDPSLTVRWDELDAETQSIYPRENLRQPLRIILDSKNRVT
PQHRVVQQPGQTWLARLQPDEQIWPQDVEQLTFPAHGGGVDLVVMMMQLAKRQVNSIWVE
AGAQLAGALLQAGLVDELILYIAPKLLGDNGRGLCHLPGLEHLTDAPEFVFSEVRQIGPD
LRLRLKAKY
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgcataacgacgagttttatatggctcgcgcctttgagctggcgcgactggggcgtttt
actaccgcaccgaatcccaatgtcggctgcgttatcgtgcgcgatggcgaaatcgtcggt
gagggttaccatctgcgcgccggtgaaccgcacgcggaagtccatgcgctgcgcatggcg
ggcgaaaaggcgcgcggtgccaccgcttatgtcacgcttgaaccctgtagtcaccacggc
cgcacgccgccctgtgccgatgcgttggtcgccgctggcgtagcccgtgtggttgcggcg
atgcaggatcccaacccggaagttgccggacgtggcctgtataaactgcagcaggcgggg
ctggatgtgcgccacggtttgatgctggccgaagctgaatcggtgaacctgggcttcctc
aaacggatgcgcaccggtttcccttatgtgcaactgaagctcggcgcctcactcgatggc
cgcacggcgatggcttccggcgaaagccaatggatcacttcaccgcaggcacgtcaggac
gtgcagcgtctgcgggcgcaaagcgccgctattctcagcaccagtgccaccgtattggct
gacgatccgtcactgacggtgcgctgggatgagctggacgctgaaacgcaaagcatttac
ccgcgtgaaaacctgcgtcaaccgttgcgcattattctggatagcaaaaatcgcgtcacc
ccacagcaccgggtggtacaacaaccggggcaaacctggctggcgcgcctgcagccggat
gagcaaatttggccgcaggatgtcgagcaactgaccttcccggcgcacggcggtggcgtt
gatctggtggtgatgatgatgcaactggcgaaacgccaggtgaattccatctgggtcgag
gccggcgcgcagttggccggtgccttgttgcaggccgggctggttgatgagctcattttg
tatatcgcgccaaaactgttgggtgataatggccgcggtttgtgccatttgccgggcctt
gaacacctgaccgatgcaccggaattcgtcttcagcgaagtgcggcaaatcggccctgat
ttgcggctgcggctgaaagcaaaatactga

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