Serratia quinivorans: E4343_11260
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Entry
E4343_11260 CDS
T05941
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
squ
Serratia quinivorans
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
squ03400
]
E4343_11260 (sbcD)
DNA repair and recombination proteins [BR:
squ03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E4343_11260 (sbcD)
Archaeal homologous recombinant proteins
E4343_11260 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QBX66726
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Position
2409560..2410792
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AA seq
410 aa
AA seq
DB search
MRLIHTSDWHLGQYFFTKSRAAEHQAFLRWLIEQIEQQQVDALIVAGDLFDTGSPPSYAR
ELYNRFVVDLQRTGCQLVVLGGNHDSVATLNESRELLSCLNTTVIANAQSETEQQILVLN
QRDGQPGAVLCAIPFLRPRDLLTSRAGDSGVQKQQALQEAIADHYQRLYQAACARRDALG
LALPIVATGHLTTVGVTTSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQNVAKSEH
IRYSGSPIPLSFDELGKAKSVFMVDFSAGALQQVTALEIPSFQPMQLIKGDLAQIEQQLQ
QFADYQGELPVWLDIEVATQDYLSDIQRRIQLLADQLPVEVVLLRRSKEQRRQAIEQQDK
ETLNELSVNEVFERRLAQEPEMAEERRQRMSQMFQQVVESVRHNDQEPSQ
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgatccacacctctgactggcatcttggccagtattttttcaccaaaagccgc
gccgccgaacatcaggcttttctgcgctggctgatcgaacagatcgaacaacagcaggtg
gatgcactgatcgtcgccggggacctgttcgataccggctcgccgccaagctacgcccgt
gagctgtataaccgtttcgtggtggatctgcagcgcaccggctgccagttggtggtgctg
ggcggtaaccacgactccgtggcaaccttgaatgaatcgcgtgaattgctttcctgcctg
aataccaccgtgattgccaacgcacagagcgaaaccgaacaacaaattctggtgctgaac
cagcgcgacggccagccgggtgcggtactttgtgccatccctttcctgcgcccacgcgat
ctgctcaccagccgcgccggcgactccggggtgcaaaaacagcaggcgctgcaagaggct
atcgccgaccattatcaaaggctgtaccaagcggcctgcgcgcgtcgcgatgcgctgggc
ttagccttgccgattgttgccaccggccacctgaccaccgtgggcgtcaccacctccgat
tcggtgcgcgatatctacattggcacgctggacgccttcccggcccaggccttcccgccg
gccgactacatcgcgctggggcatatacaccgcgcgcagaacgtcgccaaatccgaacat
attcgctacagcggctcgccgatcccactcagttttgacgagttgggcaaagccaaaagc
gtgtttatggtggatttcagcgcgggcgctctgcaacaggtcactgcgctggaaatcccc
agcttccaaccgatgcagcttatcaagggtgatttagcgcagatcgaacaacaattgcag
cagttcgccgattatcagggtgaactaccggtgtggctggacattgaagtggcaacacag
gactaccttagtgacattcagcgccgcatccagttactggccgatcaactgccggtagaa
gtagtgttattgcgccgcagcaaagaacagcggcgccaggccattgaacagcaggacaag
gaaacgctcaatgaactgagcgtcaacgaggtgttcgaacggcggctggcgcaggagcct
gaaatggccgaagaacgtcggcaacgaatgagccaaatgttccagcaggtggtcgagtcc
gtgcggcacaacgaccaggagccgagccaatga
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