Serratia quinivorans: E4343_11265
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Entry
E4343_11265 CDS
T05941
Symbol
sbcC
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
squ
Serratia quinivorans
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
squ03400
]
E4343_11265 (sbcC)
DNA repair and recombination proteins [BR:
squ03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
E4343_11265 (sbcC)
Archaeal homologous recombinant proteins
E4343_11265 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
ABC_tran
nSTAND3
cobW
GTP_EFTU
NTPase_1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBX66727
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All DBs
Position
2410789..2414040
Genome browser
AA seq
1083 aa
AA seq
DB search
MKILSLRLKNLNSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGVGYRAFWSQRRAKNAPDGNLQAPKVELALRED
GKILADKVRDKLDMTAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTEI
YGQLSERVFEQHKQARADLDALHQRASGIELLNDEQRQQLENQLIELGTQENTLGEQARQ
QQQALNWLQQWQQTQQKQQEYQRQLNAAQQEQAAAEPQLQQLARSEPAEKLRPLLNERNR
CSNDQQELQQQISQLTQQQEQQLAQMAPLQQAVEQARAQLQAHVEHQQAQQRLIDEQVVP
LDHQIAQLQKTQAELQQACDSAAQQYAQQKTALEQLEVQRSQLTAQAGQHQEKLNGLTAA
LTAQQQQQNTLEAQSPLMVLRQRQTELAELRPVRQQLFTLSSLFSQVSERLEQQRKEFAA
RQTQLGEHEKQLEETRQQYKQQKAHQTDVEKALELEQRIVSLEAERARLQTGEPCPLCGS
CSHPAIEQYQAVKPSETALRLAQMRATTEALYTQGTELRTRCESLKEQQQRQQQLITQDE
QQLATHLQQWQTLSTPLAFDFTLQDADRLSQWLNACDNEERQGQATLLQHEQASHAVQQA
KDQLAALQTQQQQAHQEKARLDERYILLEKGHAEAQLQQQRLQQQWQDGERVLGEQRSQR
LALFGEQQITQVREQLRARQTACEQASQQAAEQWQKAQEQRDRLSGQLAGLQQQLLQQTE
RLQQAEQVWLQALAASEFSDETAFSAALLDDDQRRQLQQRKEQLQQRQVEASALLAQAVD
SLKQQFQQRPEGLDEHQTDPQALSQSLAALAQQLKTLQLRQGEVRNQLESDTARRINQQS
LFEQISQSQSQYDDWSYLNQLIGSKEGDKFRKFAQGLTLDHLVYLANNQLGRLHGRYLLQ
RKTSDALELQVVDTWQADALRDTRTLSGGESFLVSLALALALSDLVSHKTSIDSLFLDEG
FGTLDAETLDTALDALDSLNASGKTIGVISHVEAMKERIPVQIKVKKVNGLGISRLEPQF
RLE
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcagcctgagattaaaaaaccttaactccctgcagggtgaatggaagatc
gattttaccgccgagccctttgccagcaatgggttattcgccatcaccgggcctaccggg
gcaggcaaaaccaccctgctggacgccatctgtctggcgctgtaccaccagacgccgcgc
cttaacgtcacgccgagccaaaacgagctgatgacgcgccacaccgccgaatcgctggcg
gaggtcgaatttgaagttaaaggggtcggctatcgcgccttctggagccagcgccgcgcc
aaaaatgccccggacggcaacctgcaggcaccgaaggtggagctggcgctgcgtgaagac
ggaaaaattctggcggacaaggtacgcgacaagctggatatgaccgccgcgatcaccggg
ttggacttcggccgcttcaccaaatcgatgatgttatcccaggggcagttcgccgccttc
ctcaatgccgatgccaacgatcgtgccgaactgctggaggaactgaccggcaccgagatc
tacggccagctttccgagcgggttttcgaacagcataagcaggccagggccgatttggat
gcgctgcatcaacgcgccagcggcattgaactgctcaatgacgaacagcgtcagcagctt
gaaaaccaattaattgagctgggaacgcaggaaaatacccttggcgaacaggcccgccag
cagcagcaggcgctgaactggttacagcagtggcaacaaacacaacaaaaacaacaggaa
taccaacgtcaactgaacgcggcccagcaggagcaggcggcggccgaaccgcaactgcag
cagttggcgcgcagcgagccggcagaaaaactgcggccgctgctgaatgaacgtaaccgc
tgcagcaacgatcagcaggagctgcaacagcagataagccaattaacgcaacagcaagag
caacagctagcccagatggcgccgttgcaacaggcggtggagcaggcccgtgcgcaactg
caggcgcatgttgaacatcagcaggcgcaacagcggctgatcgacgagcaagtcgtcccg
ctcgatcaccagattgcccagttacagaaaacgcaggccgagctgcaacaggcgtgcgat
agcgccgcacagcagtatgcccagcaaaaaacagcgctggaacagctcgaggttcagcga
agccagttgaccgcacaggccgggcagcatcaggaaaaacttaacggcctcaccgccgcg
ctgacggcgcaacagcaacaacaaaatacgctggaagcccagtcgcccctgatggtactg
cgccagcgccagaccgaactggccgagctgcgcccggtacgccagcagttatttaccctg
tcttccctgtttagccaggtcagcgaacgtctggagcagcagcgcaaggagtttgccgcc
cgccagacgcaactcggcgaacatgaaaaacagctcgaagagacgcggcagcagtataaa
cagcaaaaagcccaccagacagacgtggagaaagccctcgagctggaacagcgcatcgtc
agcctggaagccgagcgcgcccgcctgcaaaccggtgaaccctgtccgctgtgcggctcc
tgcagccacccggccattgagcagtatcaggcggtaaaaccttctgaaaccgcattgcgc
ctggcccagatgcgcgccacaaccgaggctttgtatactcagggcaccgaactgcgcacc
cgttgcgaaagcctgaaagaacagcaacagcgccaacagcagctcatcacgcaagacgag
caacagttggctactcacctgcagcagtggcaaaccctcagtacaccgctggcatttgac
tttaccctgcaagacgccgaccgcctgagccaatggctgaacgcctgcgacaacgaagaa
cgtcagggtcaggccaccctgctgcaacacgaacaggcgtcgcacgccgtgcagcaggcc
aaagaccaattggccgcactgcaaacgcaacagcagcaggcgcaccaagagaaagcccgg
ctggacgagcgttacatcctgctggagaaaggccacgcagaggcccagttgcaacagcag
cggctgcagcaacagtggcaggacggcgaacgagtccttggcgagcaacgttcgcagcgt
ctggccctgtttggtgaacagcaaatcacccaggtgcgcgaacagttacgcgcccgccag
acggcctgcgagcaggccagccagcaggcggccgaacagtggcagaaggcacaagagcaa
cgcgatcggctgagcggccagttggccgggttacaacagcaactgctgcaacagaccgag
cggctgcaacaggcggaacaagtgtggctacaggcgttggccgccagtgaattcagcgat
gaaaccgccttcagcgccgcgctgttggatgacgaccagcgccgacagctgcaacagcgc
aaagagcagctgcaacagcgccaggttgaagccagcgccctgctggcacaggccgttgac
agcctgaaacagcagtttcaacagcgtcccgaagggctggatgagcatcagaccgatccc
caggccctgagccagagtctggcagcgctggcgcagcagttaaaaaccttgcagctacgc
cagggcgaagtacgcaatcaattagaaagcgacactgcccgccgcatcaatcagcagtcg
ctgtttgagcaaatcagccagagccagagccagtacgacgactggagctatctcaatcag
cttatcggctccaaagaaggggataaattccgtaagtttgcccaggggctgacgctcgat
cacctggtgtatctggccaataaccagttgggacggctacacggacgctatctgttgcaa
cgtaaaaccagcgatgcgctggagctacaggtagtggatacctggcaggcggacgcgctg
cgcgatacccgcaccctgtccggcggtgaaagcttcctggtgagcctggcgctggcactg
gcgctgtctgacctggtcagccacaagaccagtatcgactcgctgttcctcgacgaaggc
tttggcacgctggatgcggaaaccctggataccgcgctggatgcgctcgacagcctgaac
gcctccgggaaaaccattggcgtgatcagccacgtggaagccatgaaagaacggatcccg
gtacaaattaaggtgaaaaaggtcaacgggctcggcatcagccggctggagccgcagttc
cggctggaataa
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