Serratia quinivorans: E4343_14010
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Entry
E4343_14010 CDS
T05941
Symbol
nrdD
Name
(GenBank) anaerobic ribonucleoside-triphosphate reductase
KO
K21636
ribonucleoside-triphosphate reductase (formate) [EC:
1.1.98.6
]
Organism
squ
Serratia quinivorans
Pathway
squ00230
Purine metabolism
squ00240
Pyrimidine metabolism
squ01100
Metabolic pathways
squ01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
E4343_14010 (nrdD)
00240 Pyrimidine metabolism
E4343_14010 (nrdD)
Enzymes [BR:
squ01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.98 With other, known, physiological acceptors
1.1.98.6 ribonucleoside-triphosphate reductase (formate)
E4343_14010 (nrdD)
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Gene cluster
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Motif
Pfam:
NRDD
Gly_radical
ATP-cone
Zn_ribbon_TiaS
Zn_Tnp_IS91
DUF7129
Motif
Other DBs
NCBI-ProteinID:
QBX67224
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Position
2990276..2992414
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AA seq
712 aa
AA seq
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MKPVVIKRDGCQVPFDEARIGQAIERAALAVGIVNADYCATVARVVAQRMSQQQRVDIHE
IQQAVENQLMAGEYKQLARAYIEYRHDRDVARELRGRLNQEIRGLVEQSNMALLNENANK
DSKVIPTQRDLLAGIVAKHYAKQHILPRDVVLAHERGEIHYHDLDYSPFFPMFNCMLIDL
KGMLTNGFKMGNAEIEPPKSISTATAVTAQIIAQVASHIYGGTTINRIDEILAPFVSESF
NKHRQVAEQWQIPDAQGYAMARTEKECYDAFQSLEYEVNTLHTANGQTPFVTFGFGLGTC
WESRMIQRSILQNRIAGLGKNRKTAVFPKLVFAIRDGLNHQYGDPNYDIKQLALECASKR
MYPDILNYDQVVKVTGSFKTPMGCRSFLGTYEENGELVHDGRNNIGVISLNLPRIALEAV
GDEDRFWQLLDQRLLLAKKALMTRIARLEGIKARVAPILYMEGACGVRLKADDNIADIFK
NGRASISLGYIGLHETINALFGDQRHVYDDEALRAKAVAIVARLRAATDSWKEETGYGFS
LYSTPSENLCDRFCRLDTADFGVVPGVTDKGYYTNSFHLDVEKKVNPYDKLDFEAPYPPL
ANGGFICYGEYPNLQHNLKALEDVWDYSYSRVPYYGTNTPIDECYECGFTGEFACTSKGF
TCPKCGNHEPSKVSVTRRVCGYLGSPDARPFNAGKQEEVKRRVKHLGNGQIG
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccagtagtgattaaacgggacggttgtcaggtaccttttgacgaggcacgtatt
gggcaggctatcgagcgcgccgcgctggccgtcggtattgtcaatgccgactactgcgca
accgtcgcccgcgtagtcgctcaacggatgtcacagcagcagcgcgttgatatccatgaa
attcagcaggcggtagaaaatcagttgatggccggcgaatacaagcagctggcccgcgcc
tatattgaatatcgtcacgatcgcgacgtagcgcgtgaactgcgcgggcggctgaaccag
gagatccgcggcctggtggagcaaagcaacatggcattgctgaacgaaaacgccaacaag
gacagcaaagtgatccccacccagcgcgatctgctggccgggatcgtcgccaagcattat
gccaagcaacacatcctgccgcgtgacgtagtgctggcccacgagcgcggcgagatccac
taccacgatctcgattactcaccgttcttcccgatgttcaactgcatgttgatcgacctg
aaaggcatgctgaccaacggcttcaagatgggcaacgccgagatcgaaccgccgaagtcg
atctccaccgccactgcagtcaccgcccagatcatcgcgcaggttgccagccatatttat
ggcggcaccaccattaaccgcatcgacgagatcctggccccgttcgtcagcgaaagcttc
aacaagcatcggcaggtcgccgaacagtggcagatcccggacgcgcaaggctacgccatg
gcacgcaccgagaaagagtgttacgacgccttccagtcgctggaatatgaggtcaacacc
ctgcacaccgccaacggccagacgccgttcgtgaccttcggttttggcctgggcacctgc
tgggaatcgcggatgatccagcgttcaatcctgcaaaatcgcatcgccgggctgggcaag
aaccgcaagacggcggtgttccccaaactggtgttcgccatccgcgacggccttaatcac
cagtacggcgacccgaactacgatatcaaacagctggcgctggagtgcgccagcaagcgc
atgtacccggacatcctcaattacgatcaggtggtgaaagtcaccggctcgttcaaaacc
ccgatggggtgccgcagcttcctcggtacctatgaagaaaatggcgaactggtacacgac
ggccgcaacaatatcggcgtgatcagcctgaatctgccgcgcattgcgctggaggcggtc
ggcgatgaagaccgcttctggcaactgcttgaccaacgtttgctgttggcgaaaaaggcg
ctgatgacgcgcattgcccggctggaaggcatcaaggcccgggttgcaccaattttgtat
atggaaggcgcctgtggtgtacgcctgaaggcggacgacaatatcgccgacattttcaag
aatggccgcgcgtcgatctcactgggttatatcggcctgcatgagaccatcaacgcgctg
ttcggtgaccaacggcacgtctacgacgacgaagcgctgcgcgccaaggcggttgccatt
gttgcccgcctgcgggccgccaccgacagttggaaggaagaaaccggttatggcttcagc
ctgtacagcacgccgagcgagaacctgtgcgaccgcttctgccggttggataccgccgat
ttcggcgtggtgccgggcgtcaccgacaaaggctattacaccaacagcttccacctcgac
gtggagaaaaaggtcaatccttacgacaaactggattttgaagcgccttatcccccgttg
gccaacggcggtttcatctgttatggcgaatacccgaacctgcagcacaacctgaaagcg
ctggaagacgtgtgggattacagctacagccgcgtaccttattacggcaccaatacgccg
atcgatgagtgctacgagtgcggcttcaccggcgagtttgcctgtaccagcaagggcttc
acctgcccgaaatgcggcaaccacgagccgtccaaggtgtccgtcacccgtcgggtgtgt
ggttacctcggcagcccggacgccaggccgttcaacgccggtaagcaggaagaagtgaaa
cgccgggtgaaacacctggggaatgggcaaatcggctaa
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