Serratia quinivorans: E4343_14195
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Entry
E4343_14195 CDS
T05941
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
squ
Serratia quinivorans
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
squ03016
]
E4343_14195 (truB)
Enzymes [BR:
squ01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
E4343_14195 (truB)
Transfer RNA biogenesis [BR:
squ03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E4343_14195 (truB)
Prokaryotic type
E4343_14195 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QBX67258
LinkDB
All DBs
Position
complement(3025088..3026032)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRLYNANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVSFTQAQLDAALDSFRGDIK
QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYELQFIRWEGDELELEIHCSKGTYI
RTITDDLGELLGCGAHVIYLRRLQVATYPTERMVTLEQLNELLEQAHRQEIAPAELLDPL
LMPMDSPVENYPEVNLLPVVAGYVKQGQPVQVAGAPASGMVRITEGEERKFIGVGDIADD
GRVAPRRLVVEYFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgccgcggccgtgatatccacggtgtcctgttgctggacaaaccg
cagggcctgtcatccaacgacgccctgcaaaaagtaaagcgcctctataacgccaatcgc
gcgggtcataccggcgcgctcgacccgctggcgaccggcatgctgccaatttgcctcggt
gaggcgaccaagttttcacagttcctgctcgactccgacaaacgctatcgcgtgattgcc
cgactgggtcagcgtaccgatacctcggatgccgacggccaaattgtgcaggagcggccg
gtgagtttcacccaggcgcagctcgatgcggcgctggacagcttccgtggcgatatcaag
caggtaccttcgatgtactcggcgctgaaataccagggcaagaaactctatgagtatgct
cgccagggtatcgaagtgccgcgtgaagcacgcagcattaccgtttatgaactgcagttt
attcgctgggaaggggatgaactggagctggaaattcactgctcaaaaggcacttacatc
cgcaccatcaccgatgacctcggcgagctgctgggatgtggcgcgcacgtgatctacctg
cgtcgtctgcaggtggcgacctacccgaccgagcgcatggtcacgctggagcagttgaac
gaattgctggagcaggctcatcggcaggaaatcgccccggccgagctgctcgatccgttg
ttgatgccgatggacagcccggtggagaactacccggaagtgaatttgctgccagtggta
gcgggttacgttaagcaagggcaaccggttcaggttgccggtgcaccggcctcgggcatg
gtccgtatcaccgaaggtgaagagcgtaaatttatcggcgtcggtgatattgccgatgac
ggtcgtgtggcgccgcgccgcctggtagttgaatatttcgactaa
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