Serratia quinivorans: E4343_14955
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Entry
E4343_14955 CDS
T05941
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
squ
Serratia quinivorans
Pathway
squ00071
Fatty acid degradation
squ00280
Valine, leucine and isoleucine degradation
squ00310
Lysine degradation
squ00362
Benzoate degradation
squ00380
Tryptophan metabolism
squ00410
beta-Alanine metabolism
squ00640
Propanoate metabolism
squ00650
Butanoate metabolism
squ00907
Pinene, camphor and geraniol degradation
squ00930
Caprolactam degradation
squ01100
Metabolic pathways
squ01110
Biosynthesis of secondary metabolites
squ01120
Microbial metabolism in diverse environments
squ01200
Carbon metabolism
squ01212
Fatty acid metabolism
Module
squ_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
E4343_14955 (fadB)
00650 Butanoate metabolism
E4343_14955 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
E4343_14955 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
E4343_14955 (fadB)
00310 Lysine degradation
E4343_14955 (fadB)
00380 Tryptophan metabolism
E4343_14955 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
E4343_14955 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
E4343_14955 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
E4343_14955 (fadB)
00930 Caprolactam degradation
E4343_14955 (fadB)
Enzymes [BR:
squ01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
E4343_14955 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
E4343_14955 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
E4343_14955 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
E4343_14955 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QBX67386
LinkDB
All DBs
Position
3180642..3182831
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGETLQLHWLDNGIAELVFNAPGSVNKLDTRTVASLGEALAVLEKQTELKGLLLRST
KAAFIVGADITEFLSLFAAPAEKLQEWLNFANAIFNRLEDLPVPTISAINGYALGGGCEC
ILATDFRVASPDARIGLPETKLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDVSAKDALK
VGLVDAVVAPEKLVEAALKMLQQAIEGKLDWRAYRQPKLEPLKLSPIEAAMSFTTAKGMV
MQTAGKHYPAPMTAVKTIEAAARLGRDEALKLETASFVPLARSKEARALVGIFLNDQFVK
GQAKKLAKGIEAPKQAAVLGAGIMGGGIAYQSALKGVPVVMKDISDKSLTLGMNEAAKLL
NKQLERGKLDGMKMAQVLSTIQPTLDYAGIERAQVIVEAVVENPKIKAAVLSEVEGLIGE
NTVLASNTSTIPINHLAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEQTSDSTIAAVVAY
ASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSMLLRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMGKDYRDAIDVMFDNQRFGQKNQLGFYRYSQDNKGKP
RKDNDEQTDVLLAEVSQPRQTISDEEIIARMMIPMINEVVRCLEENIIASPAEADMALVY
GIGFPPFHGGAFRYLDTLGTANYVELAQRYAHLGALYQVPAGLRAKAEHNESYYPVAAPL
SDVSTGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaacattacaactgcactggctcgacaacggtatcgccgagctg
gtgttcaatgccccaggctcggtaaacaagctcgatacccgcaccgttgccagcctgggc
gaagcgctcgcggtgctggaaaagcagaccgagttaaaaggcctgctgctgcgttctacc
aaggccgcctttattgtcggcgccgacatcaccgaattcctttcgctgtttgctgccccg
gctgaaaagctgcaggagtggctgaacttcgccaatgcgatctttaaccggctggaagat
ctgccggtgccgaccatttcggccattaacggctatgcgctcggcggcggctgcgaatgt
attctggcgaccgacttccgcgttgcgtctccggatgcgcgtatcggcctgccggaaacc
aaactgggtattatgccgggcttcggcggctccgttcgcttgccacgccttttgggtaac
gacagcgcactggaaattattgccgccggtaaggacgtcagtgccaaagatgcactgaag
gtcggcctggtggatgcggtcgtcgcaccagaaaaattggtggaagccgcgctgaaaatg
ctgcaacaggcgattgagggcaagctggactggcgcgcctatcgccagccaaagctcgag
ccgttgaaactcagcccaatcgaagcggccatgagcttcaccaccgccaaaggcatggtg
atgcaaaccgctggcaaacattatccggcgccgatgaccgcggtcaaaaccattgaggcc
gccgccaggctgggccgtgatgaagcactgaaactggaaaccgccagctttgtgccattg
gcccgctccaaagaggcgcgcgcgctggtcggcatcttcctcaatgaccagtttgtgaaa
ggccaggcgaagaagctggcgaagggtattgaagcaccgaagcaggctgcggtgttgggc
gccggtatcatgggtggcggtatcgcctaccagtccgcgctgaaaggcgtgccggttgtc
atgaaagacatcagcgacaaatccctgacgctcggtatgaatgaagccgccaaactgctg
aacaagcagttggaacgcggcaagctcgatggcatgaagatggcccaggtgctatcgacc
attcaaccgacgctggattacgccggtatcgaacgcgcgcaggtgatcgtcgaagccgtg
gtcgagaatccaaagattaaggcggcagtattgtccgaagtggaaggcctgatcggtgaa
aataccgtactggcgtccaatacctcgaccattccgattaatcacctggcgaaatcgctg
aagcgcccacagaacttctgcggcatgcacttctttaatccggtacaccgcatgccactg
gtggaaattatccgcggcgagcagaccagcgacagcactatcgcggccgtggtggcctat
gccagccgcatgggtaaaacgccgattgtggttaacgattgcccagggttcttcgtcaac
cgtgtactgttcccgtattttgccggtttcagcatgctgctgcgcgacggggcggacttc
cgccagatcgacaaagtgatggaaaaacagtttggctggccaatgggcccggcttatctg
ctcgacgtcgtggggattgataccgcgcaccacgcccaggcggtgatggcggccggtttc
ccggaacgtatgggtaaagattaccgcgacgccatcgacgtgatgttcgataaccagcgt
tttggtcagaaaaaccagttgggcttctatcgttacagccaggacaacaaaggcaagccg
cgtaaagacaacgatgagcagaccgatgtgctgctggccgaagtcagccaaccgcgtcag
accatcagcgacgaagaaattatcgcccgcatgatgatcccgatgattaacgaagtggtg
cgctgtctggaagaaaacattattgccagcccggccgaagccgatatggcgctggtctac
ggcatcggtttccctccgttccacggcggggcgttccgttacctggatacgcttggtacc
gccaattatgtcgaactggcccagcgttatgcgcatctcggtgctttgtatcaggtgcct
gccggcctgcgcgccaaagctgaacataatgaaagctactacccggtggcagcgccgctg
tccgatgtctccactggccaaccggcatga
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