Serratia quinivorans: E4343_15140
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Entry
E4343_15140 CDS
T05941
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
squ
Serratia quinivorans
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
squ03021
]
E4343_15140 (rpoH)
Transcription machinery [BR:
squ03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E4343_15140 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QBX67422
LinkDB
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Position
complement(3220272..3221129)
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AA seq
285 aa
AA seq
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MTKEMQTLALVPQGSLEAYIRAANTYPMLTAEEERELAERLHYQGDLEAAKQLILSHLRF
VAHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVTSKDVREMESRMAAQDM
TFDPTPDDDAREGQSMAPVLYLQDKSSDFAEGIEEDNWESNAADKLAYAMEGLDERSQHI
IRARWLDDDNKSTLQELADQYGVSAERVRQLEKNAMKKLKMAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagaaatgcaaactttagctttagtgccccagggcagtttggaagcctatatc
cgggccgccaacacctatccgatgctgacggcagaggaagagcgggagctggctgaacgg
ctgcattatcagggcgatctggaagccgctaagcagctgatcctgtctcacctgcgcttt
gtcgctcatattgcccgcaattactctggttacggcctgccgcaggcggatctgatccag
gaaggtaatatcggcttgatgaaagctgttcgccgcttcaacccagaggttggggtgcgc
ctggtttcctttgcggtgcactggatcaaggcagaaattcacgagtacgtactgcgcaac
tggcgtatcgtcaaagttgctaccaccaaggcacagcgcaagctgttctttaacctgcgt
aaaaccaagcagcgtctgggctggttcaaccaggacgaggtggaattggtggcccgtgaa
ctgggcgtgaccagcaaggacgtacgcgagatggaatcccgcatggcggcacaggatatg
actttcgatccaacgccggacgacgacgcccgtgaaggccagtcgatggcgccagtgctg
tacctgcaggataaaagctctgactttgccgaaggtatcgaagaagataactgggaaagc
aacgccgcagacaaactggcctacgcgatggaaggcttggacgagcgtagtcagcatatt
attcgtgcccgttggctggacgacgataacaagtccacgctgcaagagctggccgatcaa
tatggcgtttccgctgagcgtgttcgccagttggaaaaaaatgccatgaagaaactgaaa
atggcgatcgaagcctaa
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